Factsheet for TraesCS5A01G179900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G177800.2	Wheat	nucleus	98.34	98.34
TraesCS7B01G354300.1	Wheat	nucleus	90.06	95.88
TraesCS7D01G443000.1	Wheat	nucleus	89.23	95.56
TraesCS7A01G453700.1	Wheat	nucleus	88.67	94.97
HORVU5Hr1G054880.2	Barley	mitochondrion	90.06	85.12
HORVU7Hr1G103420.7	Barley	nucleus	87.85	77.0
Os09t0307800-01	Rice	cytosol	70.99	75.59
Zm00001d005563_P006	Maize	nucleus	61.05	65.19
Zm00001d020038_P001	Maize	nucleus	61.05	62.08
GSMUA_Achr1P23230_001	Banana	cytosol	50.28	60.67
OQU89246	Sorghum	nucleus	61.33	59.52
KRH09264	Soybean	nucleus	48.62	50.43
KRH38763	Soybean	cytosol	48.62	50.43
AT2G44150.1	Thale cress	nucleus	50.55	50.41
CDX79778	Canola	cytosol	48.62	48.22
Bra004809.1-P	Field mustard	nucleus	48.9	47.84
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.45	47.48
AT3G59960.1	Thale cress	nucleus	42.54	46.81
Bra007496.1-P	Field mustard	nucleus	43.65	45.93
CDY41194	Canola	nucleus	43.65	45.53
Bra000343.1-P	Field mustard	cytosol	45.03	45.03
KRH75137	Soybean	cytosol	15.75	44.88
CDX83438	Canola	cytosol	45.03	44.17
CDX71856	Canola	nucleus	43.65	43.89
CDX95590	Canola	nucleus	43.92	43.56
CDX98400	Canola	nucleus	38.4	43.3
PGSC0003DMT400010951	Potato	cytosol	27.35	43.04
CDX67818	Canola	nucleus	37.85	42.68
Bra003396.1-P	Field mustard	cytosol	30.11	42.08
VIT_16s0039g00740.t01	Wine grape	mitochondrion	49.17	39.21
Solyc12g100290.1.1	Tomato	nucleus	46.96	39.17
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	46.13	37.03
TraesCS2A01G302100.1	Wheat	nucleus	25.97	18.73
TraesCS6A01G219600.1	Wheat	nucleus	34.81	16.43
TraesCS7A01G128600.1	Wheat	nucleus	15.19	6.87
TraesCS7A01G128300.1	Wheat	nucleus	16.57	6.76
TraesCS3A01G143300.2	Wheat	plastid	17.68	6.43
TraesCS3A01G237200.2	Wheat	nucleus	18.23	6.42
TraesCS4A01G121300.4	Wheat	mitochondrion	16.85	6.3
TraesCS5A01G165200.1	Wheat	plastid	17.4	5.8
TraesCS2A01G005000.1	Wheat	nucleus	27.9	5.58
TraesCS5A01G357700.1	Wheat	mitochondrion	1.1	5.0
TraesCS5A01G042700.1	Wheat	nucleus, plastid	17.4	4.86
TraesCS5A01G357600.1	Wheat	plastid	19.06	3.57

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
InterPro:IPR025787	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578
PANTHER:PTHR22884	PANTHER:PTHR22884:SF455	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00508
SMART:SM00570	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS5A01G179900	EnsemblPlants:TraesCS5A01G179900.1	:	:

Description

No Description!

Coordinates

chr5A:-:378509943..378517966

Molecular Weight (calculated)

41350.6 Da

IEP (calculated)

4.903

GRAVY (calculated)

-0.659

Length

362 amino acids

Sequence
(BLAST)

001: MLAESRSDAG ATAACSRSSP TRGSWGPERV FDELTKALKD PADFVDFDLP SALKEWKLGY YIPIKRNVYL TKKRVEDDGI FCSCSLSSGS PVACGKDCQC
101: GMLFSCCSSN CKCENDCANK SFQLRPLFKT KLIKTEKCGF GLIAEDEIKK GEFVIEYVGE VIDDRTCEER LWKMKRQRYT NFYLCEVSSN MVIDATNKGN
201: KSRFINHSCE PNTEMQKWTV DGETRVGIFA LRDIEKGEEL TYDYKFVQFG ADQDCHCGSS NCRKMVGTSK SVNSFVLHNG NSASSQDQHD MKKRKTTSDN
301: CIGEIIRLWD RRDKMYVPAV VHDYDEYTGM HTLLLDEETT ENFDMREEDW DFLPRPEDPE ED

Best Arabidopsis Sequence Match ( AT2G44150.1 )
(BLAST)

001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV

Arabidopsis Description

ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.