Factsheet for Zm00001d005563_P006

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020038_P001	Maize	nucleus	89.97	85.67
OQU89246	Sorghum	nucleus	90.86	82.57
Os09t0307800-01	Rice	cytosol	64.6	64.41
TraesCS7D01G443000.1	Wheat	nucleus	64.01	64.2
TraesCS7B01G354300.1	Wheat	nucleus	64.31	64.12
TraesCS7A01G453700.1	Wheat	nucleus	63.42	63.61
TraesCS5D01G184500.1	Wheat	nucleus	64.9	61.97
TraesCS5B01G177800.2	Wheat	nucleus	65.19	61.05
TraesCS5A01G179900.1	Wheat	nucleus	65.19	61.05
GSMUA_Achr1P23230_001	Banana	cytosol	50.15	56.67
HORVU5Hr1G054880.2	Barley	mitochondrion	63.72	56.4
HORVU7Hr1G103420.7	Barley	nucleus	63.72	52.3
KRH09264	Soybean	nucleus	47.49	46.13
KRH38763	Soybean	cytosol	47.2	45.85
CDX79778	Canola	cytosol	48.67	45.21
AT2G44150.1	Thale cress	nucleus	48.38	45.18
Bra004809.1-P	Field mustard	nucleus	48.97	44.86
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.85	44.83
Bra007496.1-P	Field mustard	nucleus	44.25	43.6
CDY41194	Canola	nucleus	44.25	43.23
AT3G59960.1	Thale cress	nucleus	41.3	42.55
Bra000343.1-P	Field mustard	cytosol	45.13	42.27
CDX71856	Canola	nucleus	44.54	41.94
CDX83438	Canola	cytosol	45.43	41.73
CDX95590	Canola	nucleus	44.25	41.1
CDX98400	Canola	nucleus	38.35	40.5
PGSC0003DMT400010951	Potato	cytosol	27.43	40.43
KRH75137	Soybean	cytosol	15.04	40.16
CDX67818	Canola	nucleus	37.76	39.88
Bra003396.1-P	Field mustard	cytosol	30.09	39.38
Solyc12g100290.1.1	Tomato	nucleus	46.02	35.94
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	46.61	35.03
VIT_16s0039g00740.t01	Wine grape	mitochondrion	46.31	34.58
Zm00001d051057_P002	Maize	nucleus	30.68	22.03
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	28.91	19.64
Zm00001d044020_P001	Maize	cytosol	13.86	18.36
Zm00001d003679_P006	Maize	nucleus	25.66	16.96
Zm00001d008941_P002	Maize	plastid	18.88	6.5
Zm00001d011490_P003	Maize	nucleus	18.58	6.07
Zm00001d036296_P004	Maize	nucleus, plastid	17.11	5.89
Zm00001d023333_P025	Maize	nucleus	19.47	5.81
Zm00001d016804_P002	Maize	nucleus	30.38	5.74
Zm00001d019907_P003	Maize	nucleus	17.4	5.61
Zm00001d047636_P002	Maize	nucleus	12.68	4.84
Zm00001d028890_P002	Maize	nucleus	11.8	3.6
Zm00001d006323_P069	Maize	nucleus	18.29	3.16
Zm00001d039355_P010	Maize	plastid	12.09	2.87

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100282875	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	UniProt:B4FVH7
EMBL:BT041115	EMBL:BT087905	EMBL:EU962616	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR006560	InterPro:IPR025787	ProteinID:ONM21459.1	ProteinID:ONM21462.1	PFAM:PF00856
PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578	PANTHER:PTHR22884	InterPro:Post-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00508	SMART:SM00570	SUPFAM:SSF82199	UniParc:UPI00017B79E8
EnsemblPlantsGene:Zm00001d005563	EnsemblPlants:Zm00001d005563_P006	EnsemblPlants:Zm00001d005563_T006	:	:	:

Description

sdg110bHistone-lysine N-methyltransferase ASHH3

Coordinates

chr2:+:178602326..178619356

Molecular Weight (calculated)

39238.8 Da

IEP (calculated)

7.538

GRAVY (calculated)

-0.590

Length

339 amino acids

Sequence
(BLAST)

001: MVRVGLSSAP GVNLTEQIDN VFDQLINKIE HADFDTRPFL KQLNVLGRYE PIKRNVYCTK RRIEDYGISC HCKPSPGSSV VCGRDCHCGM LFSCCSSQCE
101: CDDTCTNKSF QHRPLKKTKL IKTEKCGHGL VAEDEIKKGE FVIEYVGEVI DDRTCENRLW TMKRLLDTDF YLCEVSSNMV IDATNKGNRS RFINHSCEPN
201: TAMQKWTVDG ETRVGIFALR DIKIGEELTY DYKFVQFGAA QVCHCGSSNC RKMLGTTKYS GSSQNHHAKK KKRKTSCENC IQQFLRLWHP HKKMYVGCWI
301: IDFDQETKMH TLKFNDLHTE KFNLKEEEWH FLEVDFDED

Best Arabidopsis Sequence Match ( AT2G44150.1 )
(BLAST)

001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV

Arabidopsis Description

ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.