Factsheet for GSMUA_Achr1P23230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G443000.1	Wheat	nucleus	60.0	53.25
TraesCS7A01G453700.1	Wheat	nucleus	59.33	52.66
TraesCS7B01G354300.1	Wheat	nucleus	59.67	52.65
Os09t0307800-01	Rice	cytosol	59.33	52.35
TraesCS5D01G184500.1	Wheat	nucleus	61.0	51.55
TraesCS5A01G179900.1	Wheat	nucleus	60.67	50.28
Zm00001d005563_P006	Maize	nucleus	56.67	50.15
TraesCS5B01G177800.2	Wheat	nucleus	60.33	50.0
GSMUA_Achr2P12180_001	Banana	nucleus	61.0	49.06
HORVU5Hr1G054880.2	Barley	mitochondrion	60.0	47.0
Zm00001d020038_P001	Maize	nucleus	55.33	46.63
OQU89246	Sorghum	nucleus	55.67	44.77
HORVU7Hr1G103420.7	Barley	nucleus	60.33	43.83
GSMUA_Achr7P16220_001	Banana	nucleus	40.67	24.4
GSMUA_Achr6P30890_001	Banana	mitochondrion	40.33	22.53
GSMUA_Achr10P...	Banana	nucleus	31.33	17.12
GSMUA_AchrUn_...	Banana	nucleus	18.0	7.0
GSMUA_Achr1P24850_001	Banana	nucleus	19.33	6.58
GSMUA_Achr2P06290_001	Banana	nucleus	19.67	6.22
GSMUA_Achr1P18360_001	Banana	nucleus	20.67	6.04
GSMUA_Achr8P28030_001	Banana	nucleus	20.0	6.01
GSMUA_Achr10P...	Banana	nucleus	19.33	5.95
GSMUA_AchrUn_...	Banana	nucleus	21.0	5.48
GSMUA_Achr9P08570_001	Banana	nucleus	35.33	5.23
GSMUA_Achr7P17070_001	Banana	nucleus	22.67	3.35

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	EnsemblPlantsGene:GSMUA_Achr1G23230_001
EnsemblPlants:GSMUA_Achr1P23230_001	EnsemblPlants:GSMUA_Achr1T23230_001	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
InterPro:IPR025787	UniProt:M0S2D1	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215
PFscan:PS51578	PANTHER:PTHR22884	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00570
SUPFAM:SSF82199	UniParc:UPI000294F129	SEG:seg	:	:	:

Description

Histone-lysine N-methyltransferase ASHH3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23230_001]

Coordinates

chr1:+:17444134..17448878

Molecular Weight (calculated)

34785.7 Da

IEP (calculated)

8.174

GRAVY (calculated)

-0.586

Length

300 amino acids

Sequence
(BLAST)

001: MRDGLGVYFF SDFFKFNCKQ KQEQGSIERI FEEMLMELGG QVDFDLPSWL KKWKPAQYIS IKRNIYLTKR RIEDDGIFCS CTQLTGSSTV CDGDCHCGML
101: FSCCSSSCKC GDKCLNKPFQ HRDVKKMKVV KTEKCGFGLV ADEDIKQGDF VIEYVGEVLD DKTCEERLWK MKHRGDTNFY LCEVNHDMVI DATYKGNKSR
201: FINHSCEPNT EMQKWRVDGE TRVGIFALCD IRKGKDVTYD YQFVQFGAAQ VCHCGTHSCR QKLGNKPRSL NTVHHKRKTD YENCIGELVR VWRSKDKRCV

Best Arabidopsis Sequence Match ( AT2G44150.1 )
(BLAST)

001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV

Arabidopsis Description

ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.