Factsheet for GSMUA_Achr2P12180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38763	Soybean	cytosol	60.86	65.04
KRH09264	Soybean	nucleus	60.86	65.04
PGSC0003DMT400010951	Potato	cytosol	38.34	62.17
AT2G44150.1	Thale cress	nucleus	59.52	61.16
GSMUA_Achr1P23230_001	Banana	cytosol	49.06	61.0
CDX79778	Canola	cytosol	57.91	59.18
Bra004809.1-P	Field mustard	nucleus	58.18	58.65
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.98	58.36
CDY41194	Canola	nucleus	51.74	55.62
Bra007496.1-P	Field mustard	nucleus	50.94	55.23
AT3G59960.1	Thale cress	nucleus	47.45	53.8
CDX71856	Canola	nucleus	50.4	52.22
Bra000343.1-P	Field mustard	cytosol	50.67	52.21
VIT_16s0039g00740.t01	Wine grape	mitochondrion	63.27	51.98
KRH75137	Soybean	cytosol	17.69	51.97
Solyc12g100290.1.1	Tomato	nucleus	60.32	51.84
CDX95590	Canola	nucleus	50.67	51.78
CDX83438	Canola	cytosol	50.94	51.49
CDX98400	Canola	nucleus	43.7	50.78
CDX67818	Canola	nucleus	43.16	50.16
Bra003396.1-P	Field mustard	cytosol	34.32	49.42
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	57.91	47.89
GSMUA_Achr7P16220_001	Banana	nucleus	33.24	24.8
GSMUA_Achr6P30890_001	Banana	mitochondrion	32.44	22.53
GSMUA_Achr10P...	Banana	nucleus	27.88	18.94
GSMUA_AchrUn_...	Banana	nucleus	16.09	7.78
GSMUA_Achr1P24850_001	Banana	nucleus	17.16	7.26
GSMUA_Achr1P18360_001	Banana	nucleus	18.77	6.82
GSMUA_Achr2P06290_001	Banana	nucleus	15.82	6.22
GSMUA_Achr9P08570_001	Banana	nucleus	33.24	6.12
GSMUA_Achr8P28030_001	Banana	nucleus	16.09	6.01
GSMUA_Achr10P...	Banana	nucleus	14.75	5.64
GSMUA_AchrUn_...	Banana	nucleus	17.16	5.57
GSMUA_Achr7P17070_001	Banana	nucleus	18.77	3.45

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	EnsemblPlantsGene:GSMUA_Achr2G12180_001
EnsemblPlants:GSMUA_Achr2P12180_001	EnsemblPlants:GSMUA_Achr2T12180_001	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
InterPro:IPR025787	UniProt:M0S7A9	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215
PFscan:PS51578	PANTHER:PTHR22884	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00508
SMART:SM00570	SUPFAM:SSF82199	UniParc:UPI000296DB30	SEG:seg	:	:

Description

Histone-lysine N-methyltransferase ASHH3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G12180_001]

Coordinates

chr2:-:14698488..14704750

Molecular Weight (calculated)

42355.6 Da

IEP (calculated)

7.947

GRAVY (calculated)

-0.507

Length

373 amino acids

Sequence
(BLAST)

001: MKNKIFCGGG GGGSGGTVFQ QLMQQLGDEE PVDFQLPDWS KKQKSAPYNF IRRNVYLTKR IKRRAADDGI FCSCSPSPGN SVVCGRDCLC GMLLSCCSQS
101: CKCGNLCVNK PFQYRPVKKM KLIETEKCGS GVVTEEDIRQ GDFVIEYVGE VIDDKTCEER LWKMKHCGET NFYLCEINRD MVIDATYKGN KSRFINHSCQ
201: PNTEMQKWTI DGEIRIGIFA TRDIKKGEEL TYDYQFVQFG ADQDCYCGSV GCRKKLGNKP SKLKFSSSDT ALQLVLCEIA ASSPNSKALL YGKANLESGR
301: LNMEGSPSFV ARKRKSEFHN CIYEVVRIWS PQYKRYYGGV ILEFDCYSRK HTIITEDERV ENVDLSKEDW DFL

Best Arabidopsis Sequence Match ( AT2G44150.1 )
(BLAST)

001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV

Arabidopsis Description

ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.