Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0556700-01 | Rice | nucleus | 15.19 | 58.44 |
| VIT_04s0008g06180.t01 | Wine grape | nucleus | 24.52 | 43.87 |
| KRH05241 | Soybean | nucleus | 31.08 | 31.0 |
| KRH15817 | Soybean | nucleus | 30.39 | 30.68 |
| KXG36166 | Sorghum | nucleus, plastid | 26.94 | 28.66 |
| Zm00001d006323_P069 | Maize | nucleus | 26.54 | 27.46 |
| TraesCS5A01G357600.1 | Wheat | plastid | 24.72 | 25.93 |
| TraesCS5D01G366700.1 | Wheat | plastid | 24.77 | 25.9 |
| HORVU5Hr1G088420.21 | Barley | plastid | 24.82 | 25.76 |
| TraesCS5B01G360200.1 | Wheat | plastid | 24.32 | 25.54 |
| GSMUA_Achr1P23230_001 | Banana | cytosol | 3.35 | 22.67 |
| GSMUA_Achr7P16220_001 | Banana | nucleus | 4.64 | 18.8 |
| GSMUA_Achr2P12180_001 | Banana | nucleus | 3.45 | 18.77 |
| GSMUA_Achr6P30890_001 | Banana | mitochondrion | 4.29 | 16.2 |
| GSMUA_Achr10P... | Banana | nucleus | 7.3 | 15.18 |
| GSMUA_Achr2P06290_001 | Banana | nucleus | 6.46 | 13.8 |
| GSMUA_Achr8P28030_001 | Banana | nucleus | 6.66 | 13.51 |
| GSMUA_Achr1P18360_001 | Banana | nucleus | 6.61 | 13.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 4.54 | 11.93 |
| GSMUA_Achr10P... | Banana | nucleus | 3.16 | 11.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 6.17 | 10.87 |
| GSMUA_Achr1P24850_001 | Banana | nucleus | 4.69 | 10.78 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 6.61 | 6.61 |
| TraesCS5A01G357700.1 | Wheat | mitochondrion | 0.1 | 2.5 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:2.170.270.10 | Gene3D:3.30.40.10 | MapMan:35.1 | ncoils:Coil | InterPro:EPHD |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 |
| GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | GO:GO:0035556 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G17070_001 |
| EnsemblPlants:GSMUA_Achr7P17070_001 | EnsemblPlants:GSMUA_Achr7T17070_001 | InterPro:IPR001214 | InterPro:IPR002219 | InterPro:IPR003616 | InterPro:IPR013083 |
| InterPro:IPR019787 | InterPro:IPR034732 | UniProt:M0TI94 | InterPro:PE/DAG-bd | PFAM:PF00856 | PFAM:PF13831 |
| PFAM:PF13832 | PFscan:PS50016 | PFscan:PS50081 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51805 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF454 | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00249 | SMART:SM00317 |
| SMART:SM00508 | SUPFAM:SSF57903 | SUPFAM:SSF82199 | UniParc:UPI0002961DD8 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
ATXR, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G17070_001]
Coordinates
chr7:+:18218625..18233835
Molecular Weight (calculated)
223453.0 Da
IEP (calculated)
8.290
GRAVY (calculated)
-0.564
Length
2027 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNLRHHFPSF LAQEAVLKDQ VRSQEASASD TFNLSSYRLG KTELGNSFLA LLSGKFSQLP NSRMDVAKPQ VSNDDKILSG SGCVVPSINI PPLPENHGDN
0101: APGNWNELSS FVASRPSVNS ASVHNSAQVA GNSYHDMDSI ELVSPQSSKC SNTGFALNST RSGWLTSSKS ANGNKHATMD VQASRIVSFE AKPPVSNNNS
0201: PFLRGHPLIL APNDISGWEW TGGSSTKGVF FGSKASNAPT LVNNIGTISD IKSFGGSWRS AEPLNNSVVP SHPYTLVGHT AQEKSVNKVQ DNEYQRYNLD
0301: GCNLFQEKIH SSEQVIKSVL SKNQSMQIAK QSPTCVGSEK LHSTLCKGKE IIDHYLDTDG VNYNTKFVDQ SVALPCLWAN NSVNHDCDIS SNNFSIDTSL
0401: ADKDGASNIE LRLGQPSQKC HIFAGSYPTP VLEFGATCNP KKPHFHQQLK QQVDNAYDRK KTSQSLHFTA SETLCSNKRL ERHATTAVNT YNHSESEDLS
0501: RSANKNPLIS LFLSHLEGNS TSLSLDNFFN SSDHLPSRVP SGDSPVKLKV SNPVGDATHG IERKSEASKL DFLNILDERK SLLAADNGIV KSVCIVKDNQ
0601: IANTREIDTS FSKKCPQISV SVDASQTSFY PDQLSGMLQK LGGKIPKQHD LASVSNKDYC NHAVHGSSDP VPSEMVGHDS LNSDIPMSLA STSLCSLEPK
0701: KKVLNTTQHL MDVNLKNFAF RHMVGLTTQK SSTSLKKSPQ HHKLCCLSSM EPQLDGCQDL EMQRDAGEGN YCRNYHEISK IAIKSVHSCP SCQSGRGMDI
0801: FPGHPCHTGS TRSCNCTGST QRVPLSSEKY CKRFSTCCIC DVDEQPCLRL GRLGSNCFTG SLKHGMCNHK EHNSCLSQHC CSSVLPYCVS GFCTSGGNKT
0901: FHALSERRVC GQAKVMHATP DHDKDYLIPD RKRICLAHCG CSKNKFVPRN DQKTSFWRDV PKKVYADADI SSTFKIAQAL ETTKRIGDQL DDCSPEFDGT
1001: RQSSQSTRAQ KMFNMSSGSS APVVTEVSTE VNNLTSCAAN IRTTNMIHDL LVDEGSGNEK CGSSDEAVGG RECEETIHIM GKVDVATPGF HHLAGHSSVG
1101: LIDELCLMSP LKTKRVRNMN KCCADQENVN KNLNFERTPK TANRNESMEL NGPDMLIPLS DYAFPSEIPN NLRHLEIDHS RSQGEVSPQP VSVKKKTHLS
1201: TCGSSSVKRK RSSLSCNKSN FERFSIQHKL QEDIEKRILD DDHSLSRVET SRKKTKQVLA AYLKQENSTR TGKPPKYMSL NCIGNTFSNI KTTLPKKSRP
1301: IVCGNSGIIY CGETDGDQKP PKIISLSLIL KNARRCSTVE VYNTSLGLDN ELSSLKLLHE KDMPSSCSEN GQNPKFLRIS GENKGYSSKN GGYLDTLSAG
1401: KETDSVLGPG LHPKQLKSQS RPKQKDVHTQ SLNRFGAKHR HATKNSCLSA SGINECSKSI EAENELNDFP STTVGNVLLK NNQDHAGKLS QVSRRRCSQG
1501: YKFPSFLLNS DSFCCVCGSS NQDDANHLIE CNDCLIKVHQ ACYGVSKIPK GHWSCRPCKA NSQNIVCVLC GYGGGAMTRA LKCQNIVKSL LKAWRVSKTS
1601: YSGKSVPSES TENEFFNPSS VGEVPKFDKC GLAPLGEIIS DFSPKAALKL DMQMQTNFPE SKNCMPEKFQ THNSITAGVL DPSTKQWVHM VCGLWTPGTR
1701: CPNVDTMSTF DVSGALPAKK NIVCSICNRP GGSCIECRVP TCCIPFHPWC AHQKGLLQSE IEGDDNERVG FYGRCPHHAT LNSCLPDSHV MDPEEESPGN
1801: NEWTCARTEG FKGRKREKGY KPNTQRPCDN GVCIVSQEQI NAWLHINGQK SCTRGVVRQP CSDVEYDLRK EYIRYKQSKG WKHLVVYKSG IHALGLYTSQ
1901: FIARGAMVVE YVGEIVGLRV ADKREAEYQS GRRIQYKSAC YFFRIDKEHI IDATRKGGIA RFVNHSCLPN CVAKVISIRN EKKVVFFAER DINPGEEITY
2001: DYHFNSEDEG KKIPCFCNSR NCRRYLN
0101: APGNWNELSS FVASRPSVNS ASVHNSAQVA GNSYHDMDSI ELVSPQSSKC SNTGFALNST RSGWLTSSKS ANGNKHATMD VQASRIVSFE AKPPVSNNNS
0201: PFLRGHPLIL APNDISGWEW TGGSSTKGVF FGSKASNAPT LVNNIGTISD IKSFGGSWRS AEPLNNSVVP SHPYTLVGHT AQEKSVNKVQ DNEYQRYNLD
0301: GCNLFQEKIH SSEQVIKSVL SKNQSMQIAK QSPTCVGSEK LHSTLCKGKE IIDHYLDTDG VNYNTKFVDQ SVALPCLWAN NSVNHDCDIS SNNFSIDTSL
0401: ADKDGASNIE LRLGQPSQKC HIFAGSYPTP VLEFGATCNP KKPHFHQQLK QQVDNAYDRK KTSQSLHFTA SETLCSNKRL ERHATTAVNT YNHSESEDLS
0501: RSANKNPLIS LFLSHLEGNS TSLSLDNFFN SSDHLPSRVP SGDSPVKLKV SNPVGDATHG IERKSEASKL DFLNILDERK SLLAADNGIV KSVCIVKDNQ
0601: IANTREIDTS FSKKCPQISV SVDASQTSFY PDQLSGMLQK LGGKIPKQHD LASVSNKDYC NHAVHGSSDP VPSEMVGHDS LNSDIPMSLA STSLCSLEPK
0701: KKVLNTTQHL MDVNLKNFAF RHMVGLTTQK SSTSLKKSPQ HHKLCCLSSM EPQLDGCQDL EMQRDAGEGN YCRNYHEISK IAIKSVHSCP SCQSGRGMDI
0801: FPGHPCHTGS TRSCNCTGST QRVPLSSEKY CKRFSTCCIC DVDEQPCLRL GRLGSNCFTG SLKHGMCNHK EHNSCLSQHC CSSVLPYCVS GFCTSGGNKT
0901: FHALSERRVC GQAKVMHATP DHDKDYLIPD RKRICLAHCG CSKNKFVPRN DQKTSFWRDV PKKVYADADI SSTFKIAQAL ETTKRIGDQL DDCSPEFDGT
1001: RQSSQSTRAQ KMFNMSSGSS APVVTEVSTE VNNLTSCAAN IRTTNMIHDL LVDEGSGNEK CGSSDEAVGG RECEETIHIM GKVDVATPGF HHLAGHSSVG
1101: LIDELCLMSP LKTKRVRNMN KCCADQENVN KNLNFERTPK TANRNESMEL NGPDMLIPLS DYAFPSEIPN NLRHLEIDHS RSQGEVSPQP VSVKKKTHLS
1201: TCGSSSVKRK RSSLSCNKSN FERFSIQHKL QEDIEKRILD DDHSLSRVET SRKKTKQVLA AYLKQENSTR TGKPPKYMSL NCIGNTFSNI KTTLPKKSRP
1301: IVCGNSGIIY CGETDGDQKP PKIISLSLIL KNARRCSTVE VYNTSLGLDN ELSSLKLLHE KDMPSSCSEN GQNPKFLRIS GENKGYSSKN GGYLDTLSAG
1401: KETDSVLGPG LHPKQLKSQS RPKQKDVHTQ SLNRFGAKHR HATKNSCLSA SGINECSKSI EAENELNDFP STTVGNVLLK NNQDHAGKLS QVSRRRCSQG
1501: YKFPSFLLNS DSFCCVCGSS NQDDANHLIE CNDCLIKVHQ ACYGVSKIPK GHWSCRPCKA NSQNIVCVLC GYGGGAMTRA LKCQNIVKSL LKAWRVSKTS
1601: YSGKSVPSES TENEFFNPSS VGEVPKFDKC GLAPLGEIIS DFSPKAALKL DMQMQTNFPE SKNCMPEKFQ THNSITAGVL DPSTKQWVHM VCGLWTPGTR
1701: CPNVDTMSTF DVSGALPAKK NIVCSICNRP GGSCIECRVP TCCIPFHPWC AHQKGLLQSE IEGDDNERVG FYGRCPHHAT LNSCLPDSHV MDPEEESPGN
1801: NEWTCARTEG FKGRKREKGY KPNTQRPCDN GVCIVSQEQI NAWLHINGQK SCTRGVVRQP CSDVEYDLRK EYIRYKQSKG WKHLVVYKSG IHALGLYTSQ
1901: FIARGAMVVE YVGEIVGLRV ADKREAEYQS GRRIQYKSAC YFFRIDKEHI IDATRKGGIA RFVNHSCLPN CVAKVISIRN EKKVVFFAER DINPGEEITY
2001: DYHFNSEDEG KKIPCFCNSR NCRRYLN
0001: MISMSCVPKE EEGEDTQIKT ELHDHAADNP VRYASLESVY SVSSSSSSLC CKTAAGSHKK VNALKLPMSD SFELQPHRRP EIVHVYCRRK RRRRRRRESF
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES
Arabidopsis Description
ATX2Histone-lysine N-methyltransferase ATX2 [Source:UniProtKB/Swiss-Prot;Acc:P0CB22]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.