Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G453700.1 | Wheat | nucleus | 6.25 | 1.48 |
| TraesCS2A01G302100.1 | Wheat | nucleus | 7.5 | 1.2 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 5.0 | 1.1 |
| TraesCS2A01G005000.1 | Wheat | nucleus | 22.5 | 0.99 |
| TraesCS6A01G219600.1 | Wheat | nucleus | 5.0 | 0.52 |
| Os09t0556700-01 | Rice | nucleus | 2.5 | 0.38 |
| TraesCS3A01G143300.2 | Wheat | plastid | 2.5 | 0.2 |
| TraesCS5A01G165200.1 | Wheat | plastid | 2.5 | 0.18 |
| VIT_04s0008g06180.t01 | Wine grape | nucleus | 2.5 | 0.18 |
| TraesCS7A01G128600.1 | Wheat | nucleus | 1.25 | 0.12 |
| KXG36166 | Sorghum | nucleus, plastid | 2.5 | 0.1 |
| TraesCS5B01G360200.1 | Wheat | plastid | 2.5 | 0.1 |
| TraesCS5A01G357600.1 | Wheat | plastid | 2.5 | 0.1 |
| TraesCS4A01G121300.4 | Wheat | mitochondrion | 1.25 | 0.1 |
| TraesCS5D01G366700.1 | Wheat | plastid | 2.5 | 0.1 |
| HORVU5Hr1G088420.21 | Barley | plastid | 2.5 | 0.1 |
| Zm00001d006323_P069 | Maize | nucleus | 2.5 | 0.1 |
| KRH15817 | Soybean | nucleus | 2.5 | 0.1 |
| GSMUA_Achr7P17070_001 | Banana | nucleus | 2.5 | 0.1 |
| KRH05241 | Soybean | nucleus | 2.5 | 0.1 |
| TraesCS3A01G237200.2 | Wheat | nucleus | 1.25 | 0.1 |
| TraesCS5A01G042700.1 | Wheat | nucleus, plastid | 1.25 | 0.08 |
| TraesCS7A01G128300.1 | Wheat | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G357700.1 | EnsemblPlantsGene:TraesCS5A01G357700 | InterPro:CX9C | InterPro:Cys_alpha_HP_mot_SF | PANTHER:PTHR28066 | PANTHER:PTHR28066:SF3 |
| PFAM:PF16860 | PFscan:PS51808 | SUPFAM:SSF47072 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5A:+:559744967..559746403
Molecular Weight (calculated)
9153.5 Da
IEP (calculated)
10.629
GRAVY (calculated)
-0.546
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MGRKAGLYIN PKKFGGIVKP CMMEMTAFLN CLALNKQIDE KCTRQKELLI TCTQAQKGRP KNAAKTINYH LQRLGRDKFH
1: MSVFRLVERA IMGRKAGNLY INPKKLGNLA KPCMKEMVSF LNCMALNNIK DDKCEKQKQL LSVCMQGQSD HKNKSWGNIN YHLQRLTRGR K
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Z3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.