Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G007100.1 | Wheat | nucleus | 97.68 | 96.51 |
| TraesCS2B01G015500.1 | Wheat | nucleus | 88.84 | 89.58 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 87.02 | 86.92 |
| OQU85110 | Sorghum | nucleus | 50.28 | 47.79 |
| Zm00001d016804_P002 | Maize | nucleus | 44.2 | 44.57 |
| VIT_18s0001g01700.t01 | Wine grape | nucleus | 19.94 | 34.64 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 5.52 | 29.59 |
| Solyc04g057880.2.1 | Tomato | nucleus | 22.49 | 29.15 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 5.58 | 27.9 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 28.67 | 25.62 |
| Solyc06g059960.2.1 | Tomato | nucleus | 23.54 | 25.59 |
| Bra015678.1-P | Field mustard | nucleus | 23.31 | 25.47 |
| CDX87527 | Canola | nucleus | 23.31 | 25.47 |
| CDX88357 | Canola | nucleus | 23.2 | 25.35 |
| TraesCS2A01G302100.1 | Wheat | nucleus | 6.74 | 24.3 |
| KRH64610 | Soybean | nucleus | 27.13 | 23.56 |
| KRH53306 | Soybean | nucleus | 26.52 | 23.53 |
| AT1G77300.1 | Thale cress | nucleus | 23.26 | 23.32 |
| TraesCS5A01G357700.1 | Wheat | mitochondrion | 0.99 | 22.5 |
| TraesCS6A01G219600.1 | Wheat | nucleus | 7.35 | 17.34 |
| TraesCS7A01G128300.1 | Wheat | nucleus | 5.41 | 11.05 |
| TraesCS7A01G128600.1 | Wheat | nucleus | 4.31 | 9.74 |
| TraesCS4A01G121300.4 | Wheat | mitochondrion | 5.03 | 9.4 |
| TraesCS3A01G143300.2 | Wheat | plastid | 4.92 | 8.94 |
| TraesCS5A01G165200.1 | Wheat | plastid | 5.25 | 8.75 |
| TraesCS3A01G237200.2 | Wheat | nucleus | 4.86 | 8.56 |
| TraesCS5A01G042700.1 | Wheat | nucleus, plastid | 5.64 | 7.88 |
| TraesCS5A01G357600.1 | Wheat | plastid | 7.57 | 7.09 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | Gene3D:3.30.40.100 | InterPro:AWS_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | InterPro:IPR001214 | InterPro:IPR003616 |
| InterPro:IPR006560 | InterPro:IPR011124 | PFAM:PF00856 | PFAM:PF07496 | PFscan:PS50280 | PFscan:PS50868 |
| PFscan:PS51050 | PFscan:PS51215 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | InterPro:Post-SET_dom | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS2A01G005000 | EnsemblPlants:TraesCS2A01G005000.1 |
| InterPro:Znf_CW | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:2638695..2653361
Molecular Weight (calculated)
199485.0 Da
IEP (calculated)
6.971
GRAVY (calculated)
-0.711
Length
1810 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVDKAAETSQ LEVAAEGVVL WDEALVKTSP EDLQMRCKEL RCYNDIPVMC LKKDVNCDLE KDGLLPKIEA EVSTPAHQDS VPLNFGRNLA VCLDSKAGEI
0101: GEVSEHRTGM ERAACGSQGG GMLSFDHGFW KGAVGDKNQF PRMEGCHENG GLSDLGNHDT DKFPQGADAL SLIDDNHELG RDCFLANIDE EVSFPVDEAL
0201: VPSFYQKSHM DVFVEDSKSC IEKLTQDSLE GDMLSCERDA RFRTEASGDE NQHRMVVSKG QVSSICEDAN SPSLNACGLF PEIEVLRQQA DKEYKVFELP
0301: PEIYLARSSY NPPCLDGLCR SGKESSAVCL GHQDSSGVKS RRPDHLVQEL NAYNSSIDKP CSANFVENAN DEESQNKISE SLNASKRRNP RRAASSRNRA
0401: PAEHDHQINK GSSSTCKSKK VESSCSLVES ALIKFPSKTT KVRSGINRPV NSTAWGSLEK LADGFGQNCE PSTSNSHLIS LENGGRSNKR SGKKEQPIVR
0501: KARSSRCPKN KFPAFSVTRY APDELNGEPT FSVMDGAYGS AEGYIGNFPK LVPRAFLNVS DDAHRSVQHM SIQTDMQQLD RCLDSVAQET CPAYMCGEFA
0601: KSISEPSLNN GGVGFSPDSV LEVASVTCEN NTSASHDVKL RGNPSYPAVL TESDLHASDL SIPDFGKNHA SSSTDFEQQP KTVRGDENTR SEEINQSHAI
0701: IGYVGEGKVQ GLEKSNAVRK TKMLEKQKGR KKDGMKGNNI RDGSSTKISS SEASQYRVFS DDPSSLVSSG PLKFSSCFEV ITSATHGISM HEHGWVQGTS
0801: VIGKEKTSAL NNVKSPRCKK SGGLRGKKDM VRDPHVKQES KKKNIADAIF IDSGLSTLPC QLATNLATSH TNEQGYRSPA IEYTFQNPVA ISTELPGNAA
0901: GSTGGASVSQ PKRAAWACCD DCQKWRCIPS ELADVIGENR WTCKDNDDKA FADCSIPQAK TNAEINAELE LSDASADEAD KDGSNSKASR APSWTNLRSN
1001: TYLHRNRRNQ SIDESMVCNC KPPQDGRMGC RDGCLNRMLN IECAKRTCPC EEQCSNQQFQ RRNYAKIAWF HSGKKGYGLK LQEEVSEGRF LIEYVGEVLD
1101: ITTYESRQRD YASKGKKHFY FMALDGGEVI DACTKGNLGR FINHSCSPNC RTEKWMVNGE VCIGIFAMRN IKKDEELTFD YNYVRVSGAA PQKCFCGTAK
1201: CRGYIGGDIS GSGISTQHVA EAEYFEPMVT YKDAEEMLGN ACSHGANPSV VELEHETSIQ QEDSNNCIPV TPDSEPHQTS PILFENSELE NSWEMWSPQD
1301: AEDPTRTPVH VPRTIDSTLQ QLPVYDTQPL EFLPKAPNTM DGSKAPNVMN QSARSSDLGQ NLVVPGFHAK KKNNLKDHRD VKSSSCSTDN ENTLGVEARL
1401: NNLLDRDGGI SRRKDSTNGY LRLLLFVTAA ARDNAAAAAA RDNAAAAASH DATAMEHENA ATPAERDNAG GTSKSARDLS LILDALLKTK SRSVLLDIIN
1501: TNGLQMLHNI LKQNRDTFLR RPIIRKLLKV LEFLALKGIL RAEKINEEAP REEMERFRDS MLKLTRHSDK QVQTIARHFC EKWIHPYMDG PVSTSKWCTD
1601: SYSNRRKRKS RWDYQPESHY KMVGSLVRKV YGELGLQAGL TRNRSQPVMG GSSTGTDDDV PPGFEPQQGR SVAPGFCLPN LNISYGIPIA HVQHLGTPEV
1701: EGGGNRGQKW KVAPGVPFIP FPQLQRGSPC PSTSTQMSSH DAMRQNNSSG YRGRGFDRGG RVQRNGRNGA RTRYPYDHQG RRFPSNHHRS ERWQPWPQEH
1801: DGGSGSRGRQ
0101: GEVSEHRTGM ERAACGSQGG GMLSFDHGFW KGAVGDKNQF PRMEGCHENG GLSDLGNHDT DKFPQGADAL SLIDDNHELG RDCFLANIDE EVSFPVDEAL
0201: VPSFYQKSHM DVFVEDSKSC IEKLTQDSLE GDMLSCERDA RFRTEASGDE NQHRMVVSKG QVSSICEDAN SPSLNACGLF PEIEVLRQQA DKEYKVFELP
0301: PEIYLARSSY NPPCLDGLCR SGKESSAVCL GHQDSSGVKS RRPDHLVQEL NAYNSSIDKP CSANFVENAN DEESQNKISE SLNASKRRNP RRAASSRNRA
0401: PAEHDHQINK GSSSTCKSKK VESSCSLVES ALIKFPSKTT KVRSGINRPV NSTAWGSLEK LADGFGQNCE PSTSNSHLIS LENGGRSNKR SGKKEQPIVR
0501: KARSSRCPKN KFPAFSVTRY APDELNGEPT FSVMDGAYGS AEGYIGNFPK LVPRAFLNVS DDAHRSVQHM SIQTDMQQLD RCLDSVAQET CPAYMCGEFA
0601: KSISEPSLNN GGVGFSPDSV LEVASVTCEN NTSASHDVKL RGNPSYPAVL TESDLHASDL SIPDFGKNHA SSSTDFEQQP KTVRGDENTR SEEINQSHAI
0701: IGYVGEGKVQ GLEKSNAVRK TKMLEKQKGR KKDGMKGNNI RDGSSTKISS SEASQYRVFS DDPSSLVSSG PLKFSSCFEV ITSATHGISM HEHGWVQGTS
0801: VIGKEKTSAL NNVKSPRCKK SGGLRGKKDM VRDPHVKQES KKKNIADAIF IDSGLSTLPC QLATNLATSH TNEQGYRSPA IEYTFQNPVA ISTELPGNAA
0901: GSTGGASVSQ PKRAAWACCD DCQKWRCIPS ELADVIGENR WTCKDNDDKA FADCSIPQAK TNAEINAELE LSDASADEAD KDGSNSKASR APSWTNLRSN
1001: TYLHRNRRNQ SIDESMVCNC KPPQDGRMGC RDGCLNRMLN IECAKRTCPC EEQCSNQQFQ RRNYAKIAWF HSGKKGYGLK LQEEVSEGRF LIEYVGEVLD
1101: ITTYESRQRD YASKGKKHFY FMALDGGEVI DACTKGNLGR FINHSCSPNC RTEKWMVNGE VCIGIFAMRN IKKDEELTFD YNYVRVSGAA PQKCFCGTAK
1201: CRGYIGGDIS GSGISTQHVA EAEYFEPMVT YKDAEEMLGN ACSHGANPSV VELEHETSIQ QEDSNNCIPV TPDSEPHQTS PILFENSELE NSWEMWSPQD
1301: AEDPTRTPVH VPRTIDSTLQ QLPVYDTQPL EFLPKAPNTM DGSKAPNVMN QSARSSDLGQ NLVVPGFHAK KKNNLKDHRD VKSSSCSTDN ENTLGVEARL
1401: NNLLDRDGGI SRRKDSTNGY LRLLLFVTAA ARDNAAAAAA RDNAAAAASH DATAMEHENA ATPAERDNAG GTSKSARDLS LILDALLKTK SRSVLLDIIN
1501: TNGLQMLHNI LKQNRDTFLR RPIIRKLLKV LEFLALKGIL RAEKINEEAP REEMERFRDS MLKLTRHSDK QVQTIARHFC EKWIHPYMDG PVSTSKWCTD
1601: SYSNRRKRKS RWDYQPESHY KMVGSLVRKV YGELGLQAGL TRNRSQPVMG GSSTGTDDDV PPGFEPQQGR SVAPGFCLPN LNISYGIPIA HVQHLGTPEV
1701: EGGGNRGQKW KVAPGVPFIP FPQLQRGSPC PSTSTQMSSH DAMRQNNSSG YRGRGFDRGG RVQRNGRNGA RTRYPYDHQG RRFPSNHHRS ERWQPWPQEH
1801: DGGSGSRGRQ
0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
Arabidopsis Description
EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.