Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015678.1-P | Field mustard | nucleus | 95.29 | 95.29 |
| CDX87527 | Canola | nucleus | 95.29 | 95.29 |
| AT1G77300.1 | Thale cress | nucleus | 73.69 | 67.65 |
| VIT_18s0001g01700.t01 | Wine grape | nucleus | 27.04 | 42.99 |
| Solyc04g057880.2.1 | Tomato | nucleus | 28.85 | 34.24 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 4.95 | 31.91 |
| Solyc06g059960.2.1 | Tomato | nucleus | 30.96 | 30.81 |
| CDX98400 | Canola | nucleus | 5.67 | 29.28 |
| CDY41194 | Canola | nucleus | 6.1 | 29.11 |
| CDX67818 | Canola | nucleus | 5.49 | 28.35 |
| CDX71856 | Canola | nucleus | 6.16 | 28.33 |
| KRH53306 | Soybean | nucleus | 34.88 | 28.33 |
| KRH64610 | Soybean | nucleus | 35.43 | 28.17 |
| CDX88310 | Canola | nucleus | 7.66 | 27.55 |
| CDX79778 | Canola | cytosol | 6.04 | 27.4 |
| CDX83438 | Canola | cytosol | 6.04 | 27.1 |
| CDX87571 | Canola | nucleus | 7.48 | 26.9 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 6.04 | 26.53 |
| CDX95590 | Canola | nucleus | 5.73 | 26.03 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 29.15 | 23.84 |
| TraesCS2B01G015500.1 | Wheat | nucleus | 25.47 | 23.51 |
| OQU85110 | Sorghum | nucleus | 26.98 | 23.48 |
| TraesCS2A01G005000.1 | Wheat | nucleus | 25.35 | 23.2 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 25.35 | 23.18 |
| TraesCS2D01G007100.1 | Wheat | nucleus | 25.35 | 22.93 |
| Zm00001d016804_P002 | Maize | nucleus | 24.38 | 22.51 |
| CDY23260 | Canola | nucleus | 6.7 | 22.47 |
| CDY36467 | Canola | nucleus | 6.64 | 22.22 |
| CDY15252 | Canola | nucleus | 4.1 | 15.35 |
| CDY32472 | Canola | nucleus | 4.89 | 12.6 |
| CDX89960 | Canola | nucleus | 4.71 | 12.23 |
| CDY37467 | Canola | nucleus | 4.89 | 12.2 |
| CDY22021 | Canola | nucleus | 6.22 | 12.09 |
| CDX95185 | Canola | endoplasmic reticulum, nucleus | 3.5 | 11.86 |
| CDY07102 | Canola | nucleus | 6.04 | 11.68 |
| CDY38942 | Canola | nucleus, plastid | 5.79 | 10.58 |
| CDY17381 | Canola | nucleus | 5.37 | 10.58 |
| CDX89569 | Canola | nucleus, plastid | 5.67 | 10.33 |
| CDY15398 | Canola | nucleus | 5.91 | 9.48 |
| CDY19078 | Canola | nucleus | 5.85 | 9.42 |
| CDX92851 | Canola | mitochondrion | 5.07 | 9.17 |
| CDY06182 | Canola | nucleus | 5.79 | 9.04 |
| CDY35655 | Canola | nucleus | 5.25 | 8.93 |
| CDY14381 | Canola | nucleus | 5.19 | 8.83 |
| CDY29869 | Canola | mitochondrion | 5.07 | 8.78 |
| CDX67860 | Canola | nucleus | 5.07 | 8.71 |
| CDY25072 | Canola | nucleus | 4.89 | 8.29 |
| CDY10007 | Canola | nucleus | 5.55 | 8.27 |
| CDY52297 | Canola | nucleus | 5.61 | 7.22 |
| CDX95184 | Canola | cytosol | 2.6 | 3.82 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | Gene3D:3.30.40.100 | GO:A0A078DHA4 | InterPro:AWS_dom |
| EnsemblPlants:CDX88357 | ProteinID:CDX88357 | ProteinID:CDX88357.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00147879001 | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 |
| InterPro:IPR011124 | PFAM:PF00856 | PFAM:PF07496 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51050 |
| PFscan:PS51215 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI0004EE05FC | InterPro:Znf_CW | SEG:seg |
Description
BnaC06g38010D
Coordinates
chrLK031855:-:539171..546641
Molecular Weight (calculated)
181100.0 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.761
Length
1657 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDCKENGVSD PSGDENLTSA AMDIGGSFSE KSMDLVTSLE TAQAASVINP AMEEDQRECF VEAEQMGEGN SVGKELEENS DAVCCVDAEQ AQGSVSDAIV
0101: LGGGGTVLPK GGRETDAESG FLNDAPEKVE SSETAKDIEN DKAGSDGFDG GNNEPSSDDV SLIRSCPFPD TVLDSGGLGC SETENRVKSS SDGDGNIPLV
0201: VSSSSAVPEM LSNSDGGLRS CDLDDIVDKE TIDPDSRLVH EDELHTDLSD KNETLLKNHN HVGSSSSESD VAGMNDDVAA DPRGQSFSRT SPIEENTSGV
0301: EANAPITDPS LVRSFPLKFG NGVIGARNPE NAVESIRIVD GNGRIGGEVA SASGTSESSP RRRSRVGKQG NLSQTNLSAP LPRKSSRKKQ SERNLESIFN
0401: CSKQKRSSVS KPDRSSQWGL PCRTAEIFLQ SNNIPYGRPP HHETKQPQNS PKNGEHNTQA SSGSCLRLKV KFGKSGGQNP LNITVSKVSG NSLPAGGIVK
0501: AGKGLEFPGP ADIVEDKLQI VETREQLKEK NNPLEKLSCR LLSVSITDEK KNQDAGGLCR KLGGDVLDEG THLSSSIVVE EGERANGTRP LDSETSPDSE
0601: VINSVQKDLP HGFSSTAEDL VNTNRGLEKQ DELLASVSPL ENGSHLIPNA KKGKHPNKSK GNGTRKGNSK SKSAKGGRKN ESHEGLEKHS FINRSAGSDD
0701: SKDHEVGRAE SNETTGALLD ANMGKAFAIN GAISQDVIHG EAVMDLTIED SSPTESAWVR CDDCFKWRRI PASVVGSIDE SSRWICMNNS EKEFAHCSIS
0801: QEMSNEEINE QLGIGQDEAD AYDYEAAKRG KDKEQKSKRL PVNKKACFRA IKTNQFLHRN RKNQTIDEIM VCHCKPPPDG RLGCGEECLN RMLNIECLHG
0901: TCPAGDLCSN QQFQKRKYVK FERFQSGKKG YGLRLLEDVR EGQFLIEYVG EVLDMQSYES RQKDYASMGQ KHFYFMTLNG NEVIDAGAKG NLGRFINHSC
1001: EPNCRTEKWM VNGEICVGIF SMKDLKKGQE LTFDYNYVRV FGAAAKKCYC GSSHCRGYIG GDPLNGDVVV QSDSDEEYPE LVILDDDESG EGILDATSKI
1101: FMDGADMQMP QNSTKVDDSK DLASQSPSSV SVKLPESEVL PSFQPTEASK ELSTDMPVID VQQEVLEKKT KGASPASKSI SRLSSDGANS DKTVKHGSGE
1201: DIKILSRPRP RTKTSRSSGS SKQALPGVNK AQTTPVKKLQ QQPIKSKGSE EVSPSGRIET FEGKLNELLD AGGGISKRRD SAKGYLKLLL LTAASRGNAN
1301: EGIQSNRDLS MILDALLKTK SRTVLVDVIN KNGLQMLHNI MKQYRRDFKK TPILRKLLKV LEYLATRDIL ALEHIVRPPP YAGMESFKQS ILTLTEHDDK
1401: QVHQIARNFR DRFIPKHLRK PWRIDREERS ESRRSPINSR FRSSQEPRYD HHSPRRAEPF ASRAATPETP SVSDGCIQPT SSSLPETNGR KRKSRWDQPS
1501: TSKEQRTMTD VQDDLPPGFS SPCTDAPNAV TAQPQAKFLS RLTVSYGIPL SIVHQCGLPC KDDPSSWSVA PGVPFSPFPP LPPVTHGEFF ANKRNGTVSD
1601: SPKRKREFSS DIGTSYFRQQ KQKVPPWIRY NGWEKTANSS IPEASNFREE DQQSRKS
0101: LGGGGTVLPK GGRETDAESG FLNDAPEKVE SSETAKDIEN DKAGSDGFDG GNNEPSSDDV SLIRSCPFPD TVLDSGGLGC SETENRVKSS SDGDGNIPLV
0201: VSSSSAVPEM LSNSDGGLRS CDLDDIVDKE TIDPDSRLVH EDELHTDLSD KNETLLKNHN HVGSSSSESD VAGMNDDVAA DPRGQSFSRT SPIEENTSGV
0301: EANAPITDPS LVRSFPLKFG NGVIGARNPE NAVESIRIVD GNGRIGGEVA SASGTSESSP RRRSRVGKQG NLSQTNLSAP LPRKSSRKKQ SERNLESIFN
0401: CSKQKRSSVS KPDRSSQWGL PCRTAEIFLQ SNNIPYGRPP HHETKQPQNS PKNGEHNTQA SSGSCLRLKV KFGKSGGQNP LNITVSKVSG NSLPAGGIVK
0501: AGKGLEFPGP ADIVEDKLQI VETREQLKEK NNPLEKLSCR LLSVSITDEK KNQDAGGLCR KLGGDVLDEG THLSSSIVVE EGERANGTRP LDSETSPDSE
0601: VINSVQKDLP HGFSSTAEDL VNTNRGLEKQ DELLASVSPL ENGSHLIPNA KKGKHPNKSK GNGTRKGNSK SKSAKGGRKN ESHEGLEKHS FINRSAGSDD
0701: SKDHEVGRAE SNETTGALLD ANMGKAFAIN GAISQDVIHG EAVMDLTIED SSPTESAWVR CDDCFKWRRI PASVVGSIDE SSRWICMNNS EKEFAHCSIS
0801: QEMSNEEINE QLGIGQDEAD AYDYEAAKRG KDKEQKSKRL PVNKKACFRA IKTNQFLHRN RKNQTIDEIM VCHCKPPPDG RLGCGEECLN RMLNIECLHG
0901: TCPAGDLCSN QQFQKRKYVK FERFQSGKKG YGLRLLEDVR EGQFLIEYVG EVLDMQSYES RQKDYASMGQ KHFYFMTLNG NEVIDAGAKG NLGRFINHSC
1001: EPNCRTEKWM VNGEICVGIF SMKDLKKGQE LTFDYNYVRV FGAAAKKCYC GSSHCRGYIG GDPLNGDVVV QSDSDEEYPE LVILDDDESG EGILDATSKI
1101: FMDGADMQMP QNSTKVDDSK DLASQSPSSV SVKLPESEVL PSFQPTEASK ELSTDMPVID VQQEVLEKKT KGASPASKSI SRLSSDGANS DKTVKHGSGE
1201: DIKILSRPRP RTKTSRSSGS SKQALPGVNK AQTTPVKKLQ QQPIKSKGSE EVSPSGRIET FEGKLNELLD AGGGISKRRD SAKGYLKLLL LTAASRGNAN
1301: EGIQSNRDLS MILDALLKTK SRTVLVDVIN KNGLQMLHNI MKQYRRDFKK TPILRKLLKV LEYLATRDIL ALEHIVRPPP YAGMESFKQS ILTLTEHDDK
1401: QVHQIARNFR DRFIPKHLRK PWRIDREERS ESRRSPINSR FRSSQEPRYD HHSPRRAEPF ASRAATPETP SVSDGCIQPT SSSLPETNGR KRKSRWDQPS
1501: TSKEQRTMTD VQDDLPPGFS SPCTDAPNAV TAQPQAKFLS RLTVSYGIPL SIVHQCGLPC KDDPSSWSVA PGVPFSPFPP LPPVTHGEFF ANKRNGTVSD
1601: SPKRKREFSS DIGTSYFRQQ KQKVPPWIRY NGWEKTANSS IPEASNFREE DQQSRKS
0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
Arabidopsis Description
EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.