CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	5.13	87.04
CDY29869	Canola	mitochondrion	87.01	83.28
Os01t0655300-01	Rice	cytosol, nucleus	4.26	75.0
AT4G27910.1	Thale cress	nucleus	79.26	70.69
CDY35655	Canola	nucleus	70.41	66.22
CDY14381	Canola	nucleus	70.31	66.12
KRH64461	Soybean	nucleus	64.3	55.57
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	59.28	55.35
KRH53486	Soybean	nucleus	63.86	54.83
VIT_16s0098g00350.t01	Wine grape	nucleus	62.66	53.2
Zm00001d044020_P001	Maize	cytosol	13.86	49.61
GSMUA_Achr10P...	Banana	nucleus	51.97	48.82
GSMUA_Achr2P06290_001	Banana	nucleus	50.0	48.26
OQU87254	Sorghum	nucleus	45.09	46.56
GSMUA_Achr8P28030_001	Banana	nucleus	50.55	46.35
TraesCS3D01G237600.2	Wheat	nucleus	49.45	44.32
TraesCS3A01G237200.2	Wheat	nucleus	49.67	44.26
TraesCS3B01G265800.1	Wheat	nucleus	49.67	44.26
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	49.45	44.2
Zm00001d011490_P003	Maize	nucleus	49.89	44.03
CDY25072	Canola	nucleus	44.76	41.97
CDX67860	Canola	nucleus	43.45	41.29
CDX67669	Canola	cytosol, nucleus, plastid	5.79	20.62
CDX67818	Canola	nucleus	6.77	19.31
CDX98400	Canola	nucleus	6.77	19.31
CDY06182	Canola	nucleus	22.16	19.11
CDX79778	Canola	cytosol	7.42	18.63
CDX83438	Canola	cytosol	7.31	18.16
CDY41194	Canola	nucleus	6.88	18.16
CDY10007	Canola	nucleus	22.05	18.15
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.42	18.04
CDY15398	Canola	nucleus	20.2	17.89
CDY19078	Canola	nucleus	20.09	17.86
CDX95590	Canola	nucleus	7.1	17.81
CDX71856	Canola	nucleus	6.77	17.22
CDY15252	Canola	nucleus	8.08	16.7
CDX95185	Canola	endoplasmic reticulum, nucleus	8.84	16.56
CDY23260	Canola	nucleus	7.97	14.78
CDY36467	Canola	nucleus	7.97	14.75
CDX87571	Canola	nucleus	6.99	13.88
CDX88310	Canola	nucleus	6.99	13.88
CDX89960	Canola	nucleus	9.06	13.01
CDY38942	Canola	nucleus, plastid	12.12	12.24
CDY32472	Canola	nucleus	8.52	12.13
CDX89569	Canola	nucleus, plastid	12.01	12.09
CDY37467	Canola	nucleus	8.62	11.9
CDY22021	Canola	nucleus	10.37	11.15
CDY07102	Canola	nucleus	10.26	10.98
CDY17381	Canola	nucleus	8.84	9.63
CDY52297	Canola	nucleus	11.57	8.23
CDX88357	Canola	nucleus	9.17	5.07
CDX87527	Canola	nucleus	8.95	4.95
CDX95184	Canola	cytosol	4.91	3.99

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	GO:A0A078DU99
EnsemblPlants:CDX92851	ProteinID:CDX92851	ProteinID:CDX92851.1	ncoils:Coil	InterPro:EPHD	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00154687001	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	PFAM:PF00628	PFAM:PF00856
PFAM:PF13831	PFAM:PF13832	PFscan:PS50016	PFscan:PS50280	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249
SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI0004EDC96B
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

BnaC07g41090D

Coordinates

chrLK031873:+:1118511..1123738

Molecular Weight (calculated)

103360.0 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.524

Length

916 amino acids

Sequence
(BLAST)

001: MIIKRELKTH MIPSLKRCRL SNSVSGSRKS SLGGYYFPLS LLGEISSGIV PGGGRNVFSA PRSHSPSTAT EAPRPPLPRT SRGRIRTLPS RFKDSVLDNW
101: RKDGKNGSEG EVERCRKEKA TSLKSKQLEE ARACVVDRER EDERVGSYGP ENFYSACVVF FGHSGNDNER DYAWVRRGMI FPFMDYVARF QEQQGCNPVR
201: FQMALEEAFL ADQGFMEKLM HDIHTAAGNS SFDDSFHRWS QDLNNNAPSE ASELMKYGNL LACVGCETAF SYEMAKKLKA LIPGDQLLCK PCSRLTKSKH
301: TCGICKKISN HLDRQTWVKC DGCKVWIHAE CDKTSDKHLK GLGETDYYCP TCRAKFNFEL SDSEKPDSKS KLGKGDGGMV LPDKVIVVCS GVEGIYFPSL
401: HLVVCKCGSC GPQKKQLSEW EKHTGSKVRN WKTSVKVKSS KLPLEEWMMK LGELHANATA ANVPKRPSIK QRKQKLRAFL SAERYEPVNA KWTTERCAVC
501: RWVEDWDYNK IIICNRGQIA VHQECYGTRN IHDFTSWVCK ACQKPSIKRD CCLCPVKASK TLSFLKVIAF LPQVCFASDE KMEPAVGILS IPSSNFVKIC
601: VICKQIHGSC TQCCKCSTYY HAICASRARY RMELHSLEKN GRQITKMLSY CAYHRAPDPD TVLIMQTSKE AFSAKSLVQN KKSGSSRLIT SIRRDHKEPP
701: AEDTVTCDDP FSAARCRVYR RNINTKKRSE EEAIPNHTRG PSHHPAEAIR TLNAFRHVPE EPKSQAFFDR TEMDRVCFGR SGIHGWGLFA KRIIQDGEMV
801: IEYRGEQVRG SIADLREAGY RREGKDCYLF KISEEVVVDA TDKGNIARLI NHSCTPNCYA RIMSVGDGES RIVLIAKANV AVGEELTYDY LFDPDEPEES
901: KVACLCKAPN CRKFMN

Best Arabidopsis Sequence Match ( AT4G27910.1 )
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Arabidopsis Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.