CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX75032
CDX76587
CDX84179
CDX84180
CDX91573
CDX99960
CDY00460
CDY16330
CDY27567
CDY31712
CDY33160
CDY35632
CDY42943
CDY43476
CDY53612
CDY71414

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02020.1	CDX75032	AT2G35670.1	15456723
AT4G02020.1	CDX84179	AT2G35670.1	15456723
AT4G02020.1	CDX84180	AT2G35670.1	15456723
AT4G02020.1	CDY31712	AT2G35670.1	15456723
AT4G02020.1	CDY33160	AT2G35670.1	15456723
AT4G02020.1	CDX75032	AT2G35670.1	16924116
AT4G02020.1	CDX84179	AT2G35670.1	16924116
AT4G02020.1	CDX84180	AT2G35670.1	16924116
AT4G02020.1	CDY31712	AT2G35670.1	16924116
AT4G02020.1	CDY33160	AT2G35670.1	16924116
AT4G02020.1	CDY27567	AT3G20740.1	15456723
AT4G02020.1	CDY53612	AT3G20740.1	15456723
AT4G02020.1	CDX76587	AT4G16845.1	15456723
AT4G02020.1	CDY35632	AT4G16845.1	15456723
AT4G02020.1	CDY42943	AT4G16845.1	15456723
AT4G02020.1	CDY43476	AT4G16845.1	15456723
AT4G02020.1	CDY71414	AT4G16845.1	15456723
AT4G02020.1	CDX91573	AT5G51230.1	15456723
AT4G02020.1	CDX99960	AT5G51230.1	15456723
AT4G02020.1	CDY00460	AT5G51230.1	15456723
AT4G02020.1	CDY16330	AT5G51230.1	15456723

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22021	Canola	nucleus	91.44	90.26
Bra036300.1-P	Field mustard	nucleus	83.47	90.0
CDY07102	Canola	nucleus	91.32	89.72
AT4G02020.1	Thale cress	nucleus	78.0	76.64
VIT_07s0005g01490.t01	Wine grape	nucleus	53.51	52.02
PGSC0003DMT400023342	Potato	nucleus	49.58	50.3
Solyc01g079390.2.1	Tomato	nucleus	49.35	50.06
CDY15252	Canola	nucleus	24.73	46.95
GSMUA_Achr1P24850_001	Banana	nucleus	45.3	43.25
Os03t0307800-01	Rice	nucleus	44.83	42.12
KXG40039	Sorghum	nucleus	44.71	41.82
TraesCS4D01G184600.3	Wheat	nucleus, plastid	43.64	41.24
TraesCS4B01G181400.3	Wheat	nucleus, plastid	43.52	41.12
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	43.64	40.24
Zm00001d047636_P002	Maize	nucleus	42.21	39.98
CDX89960	Canola	nucleus	30.32	39.97
CDY37467	Canola	nucleus	30.2	38.25
CDY32472	Canola	nucleus	28.89	37.79
TraesCS4A01G121300.4	Wheat	mitochondrion	43.28	37.6
CDY38942	Canola	nucleus, plastid	40.19	37.27
CDX89569	Canola	nucleus, plastid	39.95	36.92
Zm00001d028890_P002	Maize	nucleus	42.45	32.13
CDX98400	Canola	nucleus	5.71	14.95
CDX67818	Canola	nucleus	5.47	14.33
CDY41194	Canola	nucleus	5.71	13.83
CDX83438	Canola	cytosol	5.95	13.55
CDX79778	Canola	cytosol	5.83	13.42
CDX67669	Canola	cytosol, nucleus, plastid	4.04	13.23
CDX95590	Canola	nucleus	5.71	13.15
CDX71856	Canola	nucleus	5.59	13.06
CDY36467	Canola	nucleus	7.61	12.93
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.71	12.73
CDY23260	Canola	nucleus	7.02	11.94
CDX87571	Canola	nucleus	5.47	9.98
CDX88310	Canola	nucleus	5.47	9.98
CDX95185	Canola	endoplasmic reticulum, nucleus	5.47	9.41
CDY29869	Canola	mitochondrion	10.7	9.4
CDX67860	Canola	nucleus	10.58	9.23
CDY35655	Canola	nucleus	10.34	8.93
CDY14381	Canola	nucleus	10.34	8.93
CDY25072	Canola	nucleus	10.34	8.9
CDX92851	Canola	mitochondrion	9.63	8.84
CDY06182	Canola	nucleus	10.58	8.38
CDY19078	Canola	nucleus	9.75	7.96
CDY15398	Canola	nucleus	9.75	7.93
CDY10007	Canola	nucleus	9.99	7.55
CDY52297	Canola	nucleus	8.92	5.82
CDX88357	Canola	nucleus	10.58	5.37
CDX87527	Canola	nucleus	10.58	5.37
CDX95184	Canola	cytosol	5.35	3.99

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	GO:A0A078FWN7	UniProt:A0A078FWN7
EnsemblPlants:CDY17381	ProteinID:CDY17381	ProteinID:CDY17381.1	InterPro:CXC_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0031519	GO:GO:0032259
GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00095491001	InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214	InterPro:IPR025778	InterPro:IPR026489
PFscan:PS51576	PFscan:PS51633	PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SET_dom	SMART:SM00317
SMART:SM01114	SUPFAM:SSF82199	InterPro:Tesmin/TSO1-like_CXC	UniParc:UPI0004EE0F38	SEG:seg	:

Description

BnaA10g10150DHistone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FWN7]

Coordinates

chrLK032072:+:617023..621539

Molecular Weight (calculated)

94100.3 Da

IEP (calculated)

5.671

GRAVY (calculated)

-0.707

Length

841 amino acids

Sequence
(BLAST)

001: MVTATDDSDS SGRIRVRFAS QSHPPLIYDD DDDVDDDGAE SLVEGLDEKL NHLKMKIQGE RVRSIQERFE VNKNKVDVLH VTIPFSSNGG EDDSNVFCSR
101: MEKPLCKLTG FPHGVAERDY VPTKDVVSGS VRLPNAERIP PYTTWIFLDR QVLLNQRMVE DQSVVGRRQI YYDQHGGETL ICSDSEEEPE PEEEKREYSE
201: GEDCIIWLIG QEYGMGEKVQ DALSQFLTLD ASEILERYNE LKLKNEQNAE AFSDSGFKLG ISLEKGLSAA LDSFDNLFCR RCLVFDCRLH GCSQPLISAS
301: EKQPYWSDYE GDRNPCSKHC YLQAVREVPG GSSSFASKTE EKASEEGCSK ADSFDNPHDP AGGVNLPVEK TNTGSNNLDS SSGIEQDNKT REKREATRLE
401: DSSDLPNLSN KKQKTAVLDT KMPLVNTISR LEGDQGGKSE TSEVNRDSGA SLKELAEYIP DKTVHDGGSS SFKPEHGSGK GTMVIAEMSE TSQPSTEWKP
501: IEKDLYLKGV EMFGRNSCLI ARNLLSGLKT CLDVSSYMRE NEVSVIRRSS TPNLLLDEGR TDPGNEDDEV PPRTRLFRRK GKARKLKYST KSAGHPSVWK
601: RIAGGKNQSC KQYTPCGCLS MCGKDCPCLT NETCCEKYCG CSKSCKNRFR GCHCAKSQCR SRQCPCFAAG RECDPDVCRN CWVSCGDGSL GEAPRRGEGQ
701: CGNMRLLLRQ QQRILLGKSD VAGWGAFLKN SVSKNEYLGE YTGELISHRE ADKRGKIYDR ANSSFLFDLN DQFVLDAQRK GDKLKFANHS AKPNCYAKVL
801: KASLFTQMVL LEPAFEFMSF RVIWSDLERF ERLLQNASNR Y

Best Arabidopsis Sequence Match ( AT4G02020.4 )
(BLAST)

001: MVTDDSNSSG RIKSHVDDDD DGEEEEDRLE GLENRLSELK RKIQGERVRS IKEKFEANRK KVDAHVSPFS SAASSRATAE DNGNSNMLSS RMRMPLCKLN
101: GFSHGVGDRD YVPTKDVISA SVKLPIAERI PPYTTWIFLD RNQRMAEDQS VVGRRQIYYE QHGGETLICS DSEEEPEPEE EKREFSEGED SIIWLIGQEY
201: GMGEEVQDAL CQLLSVDASD ILERYNELKL KDKQNTEEFS NSGFKLGISL EKGLGAALDS FDNLFCRRCL VFDCRLHGCS QPLISASEKQ PYWSDYEGDR
301: KPCSKHCYLQ LKAVREVPET CSNFASKAEE KASEEECSKA VSSDVPHAAA SGVSLQVEKT DIGIKNVDSS SGVEQEHGIR GKREVPILKD SNDLPNLSNK
401: KQKTAASDTK MSFVNSVPSL DQALDSTKGD QGGTTDNKVN RDSEADAKEV GEPIPDNSVH DGGSSICQPH HGSGNGAIII AEMSETSRPS TEWNPIEKDL
501: YLKGVEIFGR NSCLIARNLL SGLKTCLDVS NYMRENEVSV FRRSSTPNLL LDDGRTDPGN DNDEVPPRTR LFRRKGKTRK LKYSTKSAGH PSVWKRIAGG
601: KNQSCKQYTP CGCLSMCGKD CPCLTNETCC EKYCGCSKSC KNRFRGCHCA KSQCRSRQCP CFAAGRECDP DVCRNCWVSC GDGSLGEAPR RGEGQCGNMR
701: LLLRQQQRIL LGKSDVAGWG AFLKNSVSKN EYLGEYTGEL ISHHEADKRG KIYDRANSSF LFDLNDQYVL DAQRKGDKLK FANHSAKPNC YAKVLNASLS
801: YPFWYEKTT

Arabidopsis Description

EZA1Histone-lysine N-methyltransferase EZA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.