Factsheet for Solyc01g079390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g093640.2.1
Solyc07g064090.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02020.1	Solyc07g064090.2.1	AT3G20740.1	15456723
AT4G02020.1	Solyc03g093640.2.1	AT5G51230.1	15456723

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023342	Potato	nucleus	96.74	96.74
VIT_07s0005g01490.t01	Wine grape	nucleus	65.5	62.77
AT4G02020.1	Thale cress	nucleus	56.69	54.91
CDY07102	Canola	nucleus	55.61	53.86
CDY22021	Canola	nucleus	54.89	53.4
Bra036300.1-P	Field mustard	nucleus	47.89	50.9
GSMUA_Achr1P24850_001	Banana	nucleus	53.8	50.62
CDY17381	Canola	nucleus	50.06	49.35
KXG40039	Sorghum	nucleus	52.96	48.83
TraesCS4D01G184600.3	Wheat	nucleus, plastid	51.51	47.98
TraesCS4B01G181400.3	Wheat	nucleus, plastid	51.51	47.98
Os03t0307800-01	Rice	nucleus	51.39	47.6
Solyc02g093200.2.1	Tomato	endoplasmic reticulum, vacuole	26.54	47.52
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	50.9	46.27
TraesCS4A01G121300.4	Wheat	mitochondrion	51.27	43.91
Zm00001d047636_P002	Maize	nucleus	45.84	42.79
Solyc03g044380.2.1	Tomato	nucleus	47.41	42.67
Zm00001d028890_P002	Maize	nucleus	47.89	35.73
Solyc02g093190.2.1	Tomato	nucleus	13.99	34.42
Solyc07g006060.2.1	Tomato	nucleus	7.6	25.61
Solyc07g008580.1.1	Tomato	nucleus	7.24	21.58
Solyc09g060000.1.1	Tomato	nucleus	5.67	17.87
Solyc07g008500.1.1	Tomato	nucleus	5.91	17.01
Solyc09g098260.1.1	Tomato	nucleus	9.77	13.78
Solyc07g008460.2.1	Tomato	nucleus	7.48	13.72
Solyc12g100290.1.1	Tomato	nucleus	7.12	13.59
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	7.12	13.08
Solyc03g112690.1.1	Tomato	nucleus	8.93	11.49
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	11.58	9.79
Solyc01g095890.2.1	Tomato	nucleus	11.58	9.16
Solyc04g057880.2.1	Tomato	nucleus	10.49	6.23
Solyc01g006880.2.1	Tomato	nucleus	11.94	6.2
Solyc06g059960.2.1	Tomato	nucleus	10.37	5.17
Solyc09g098250.2.1	Tomato	nucleus	3.5	3.93

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	UniProt:A7X9Y1	InterPro:CXC_dom
ncoils:Coil	EMBL:EU057688	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005677	GO:GO:0006139	GO:GO:0006342	GO:GO:0006464	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0031519	GO:GO:0032259
GO:GO:0034968	GO:GO:0040029	GO:GO:0048587	GO:GO:0070734	InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214
InterPro:IPR025778	InterPro:IPR026489	PFAM:PF00856	PFscan:PS50280	PFscan:PS51576	PFscan:PS51633
PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SET_dom	SMART:SM00317	SMART:SM01114	SUPFAM:SSF82199
EnsemblPlantsGene:Solyc01g079390.2	EnsemblPlants:Solyc01g079390.2.1	InterPro:Tesmin/TSO1-like_CXC	UniParc:UPI00015C29F2	SEG:seg	:

Description

Histone-lysine N-methyltransferase EZA1 [Source:Projected from Arabidopsis thaliana (AT4G02020) UniProtKB/Swiss-Prot;Acc:Q9ZSM8]

Coordinates

chr1:+:78464681..78480193

Molecular Weight (calculated)

92855.0 Da

IEP (calculated)

6.988

GRAVY (calculated)

-0.759

Length

829 amino acids

Sequence
(BLAST)

001: MISSTSISAE SAPTPTKFDG ENEEDSSASL KYRINQLKRQ IQTDRVLSVR DKLEENKRKL EIHVSELLML ATSRSDTMKN SGTGKMLSLR ISSPLCKVVG
101: LVQGSGDRDY ANGEEVVSSV TARLPFIQNI PPYTTWIFLD KNQRMAEDQS VVGRRRIYYD QHGSEALICS DSEEDIAEPE EEKRHFSEGE DKILRMASRE
201: FGLNEEVLDI LTQYVGGTTS EILEHCNVLE EKHQDTDGKS LKDSRESGFG GSMFLDKSLT AALDSFDNLF CRRCLVFDCR LHGCSQILID AIEKQPYSSD
301: SEDDRKPCGD RCYLKVKGVA NQTKYSNVDP VEGLEKHTSE AGGSTMDIKR TRDPDEHIDS KMKHGVSDSI NTTLEKSNLV LDDQQDSSGK RRKLSLPTAV
401: SVAAEDGSES NGMSISTNDY VSHSQAPDQS GYNHGTSLHE TGDNVSNEGE DTIKETVKHA SYSKNLPEWK PLEKELYLKG IEIFGRNSCL IARNLLPGLK
501: TCMEVSSYMD NRAAAQRGGS SSLFSEDNGK ADMDYMELDI PTKSRFLRRR GRTRKLKYSS KSSGHPSIWR RMADGKNQSC IQYNPCGCQP MCGKHCPCLQ
601: NGTCCEKYCG CSKSCKNRFR GCHCAKSQCR SRQCPCFAAG RECDPDVCRN CWVSCGDGSL GEPPRQGEGQ CGNMRLLLRQ QQRILLSKSE VAGWGAFLKN
701: PVYKNDYLGE YTGELISHRE ADKRGKIYDR ANSSFLFDLN DQYVLDAYRK GDKLKFANHS SNPNCFAKVM LVAGDHRVGI FAKERIEASE ELFYDYRYGP
801: DQAPIWARKP EGTKRDDSPA PLGRPKKHQ

Best Arabidopsis Sequence Match ( AT4G02020.1 )
(BLAST)

001: MVTDDSNSSG RIKSHVDDDD DGEEEEDRLE GLENRLSELK RKIQGERVRS IKEKFEANRK KVDAHVSPFS SAASSRATAE DNGNSNMLSS RMRMPLCKLN
101: GFSHGVGDRD YVPTKDVISA SVKLPIAERI PPYTTWIFLD RNQRMAEDQS VVGRRQIYYE QHGGETLICS DSEEEPEPEE EKREFSEGED SIIWLIGQEY
201: GMGEEVQDAL CQLLSVDASD ILERYNELKL KDKQNTEEFS NSGFKLGISL EKGLGAALDS FDNLFCRRCL VFDCRLHGCS QPLISASEKQ PYWSDYEGDR
301: KPCSKHCYLQ LKAVREVPET CSNFASKAEE KASEEECSKA VSSDVPHAAA SGVSLQVEKT DIGIKNVDSS SGVEQEHGIR GKREVPILKD SNDLPNLSNK
401: KQKTAASDTK MSFVNSVPSL DQALDSTKGD QGGTTDNKVN RDSEADAKEV GEPIPDNSVH DGGSSICQPH HGSGNGAIII AEMSETSRPS TEWNPIEKDL
501: YLKGVEIFGR NSCLIARNLL SGLKTCLDVS NYMRENEVSV FRRSSTPNLL LDDGRTDPGN DNDEVPPRTR LFRRKGKTRK LKYSTKSAGH PSVWKRIAGG
601: KNQSCKQYTP CGCLSMCGKD CPCLTNETCC EKYCGCSKSC KNRFRGCHCA KSQCRSRQCP CFAAGRECDP DVCRNCWVSC GDGSLGEAPR RGEGQCGNMR
701: LLLRQQQRIL LGKSDVAGWG AFLKNSVSKN EYLGEYTGEL ISHHEADKRG KIYDRANSSF LFDLNDQYVL DAQRKGDKLK FANHSAKPNC YAKVMFVAGD
801: HRVGIFANER IEASEELFYD YRYGPDQAPV WARKPEGSKK DDSAITHRRA RKHQSH

Arabidopsis Description

EZA1Histone-lysine N-methyltransferase EZA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.