Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g060000.1.1 | Tomato | nucleus | 68.06 | 74.52 |
| PGSC0003DMT400059198 | Potato | nucleus | 72.57 | 58.38 |
| Solyc07g008580.1.1 | Tomato | nucleus | 42.36 | 43.88 |
| Solyc07g008460.2.1 | Tomato | nucleus | 61.11 | 38.94 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 33.33 | 37.35 |
| VIT_18s0072g00220.t01 | Wine grape | nucleus | 41.67 | 32.43 |
| VIT_18s0072g00210.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 42.01 | 32.27 |
| Bra015723.1-P | Field mustard | nucleus | 45.83 | 28.63 |
| CDX87571 | Canola | nucleus | 45.83 | 28.63 |
| CDX88310 | Canola | nucleus | 44.79 | 27.98 |
| KRH35109 | Soybean | nucleus | 45.49 | 27.29 |
| Solyc07g006060.2.1 | Tomato | nucleus | 23.26 | 27.24 |
| AT1G76710.3 | Thale cress | nucleus | 47.92 | 26.59 |
| KRG91687 | Soybean | nucleus | 45.49 | 26.41 |
| VIT_18s0072g00200.t01 | Wine grape | nucleus | 47.22 | 26.41 |
| TraesCS2A01G302100.1 | Wheat | nucleus | 44.44 | 25.5 |
| Zm00001d003679_P006 | Maize | nucleus | 45.14 | 25.34 |
| TraesCS2D01G300800.1 | Wheat | nucleus | 44.1 | 25.3 |
| Os04t0429100-01 | Rice | nucleus | 45.14 | 25.1 |
| HORVU2Hr1G074910.11 | Barley | cytosol, nucleus | 43.75 | 25.0 |
| EES10812 | Sorghum | nucleus | 45.14 | 24.95 |
| GSMUA_Achr10P... | Banana | nucleus | 46.18 | 24.23 |
| TraesCS2B01G317900.1 | Wheat | nucleus | 44.1 | 24.01 |
| Solyc12g100290.1.1 | Tomato | nucleus | 23.26 | 15.44 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 22.57 | 14.41 |
| Solyc02g093200.2.1 | Tomato | endoplasmic reticulum, vacuole | 14.24 | 8.86 |
| Solyc03g112690.1.1 | Tomato | nucleus | 19.44 | 8.7 |
| Solyc09g098260.1.1 | Tomato | nucleus | 15.62 | 7.65 |
| Solyc01g079390.2.1 | Tomato | nucleus | 17.01 | 5.91 |
| Solyc04g057880.2.1 | Tomato | nucleus | 28.12 | 5.8 |
| Solyc03g083410.2.1 | Tomato | mitochondrion, nucleus | 19.44 | 5.71 |
| Solyc01g095890.2.1 | Tomato | nucleus | 19.1 | 5.25 |
| Solyc06g059960.2.1 | Tomato | nucleus | 29.86 | 5.17 |
| Solyc03g044380.2.1 | Tomato | nucleus | 16.32 | 5.1 |
| Solyc01g006880.2.1 | Tomato | nucleus | 18.06 | 3.26 |
| Solyc09g098250.2.1 | Tomato | nucleus | 0.69 | 0.27 |
| Solyc02g093190.2.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:IPR001214 | InterPro:IPR003616 |
| UniProt:K4CBW9 | PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PANTHER:PTHR45396 | InterPro:Post-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SUPFAM:SSF82199 | EnsemblPlantsGene:Solyc07g008500.1 | EnsemblPlants:Solyc07g008500.1.1 | UniParc:UPI000276B40E |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:3430504..3433285
Molecular Weight (calculated)
32415.6 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.605
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTHLFKDLV VERRDSGKRF QKCEYARTKL FRTEGRGWGL LADENIKAGQ FIMEYCGEVL SSEVAKKRSL SYEAHKVKDA YIMSLNANYF IDATKKGSLA
101: RFINHSCQPN CETRKWIVLG KTRVGIFAKK DISVGMELLY NYNFEWYGGA RVRCLCGAAN CSLFLGAESQ GFKLAQECSD VSEEEGNRYI MDNILLYDTT
201: DDDESSPVIS GTGEGNKHTK VLNDSEASTF KVEPTKSRTK KKSQPKPKLK LLHSSKGQVQ RPELQQPHSS STSSPLHQLS ISKDKNSI
101: RFINHSCQPN CETRKWIVLG KTRVGIFAKK DISVGMELLY NYNFEWYGGA RVRCLCGAAN CSLFLGAESQ GFKLAQECSD VSEEEGNRYI MDNILLYDTT
201: DDDESSPVIS GTGEGNKHTK VLNDSEASTF KVEPTKSRTK KKSQPKPKLK LLHSSKGQVQ RPELQQPHSS STSSPLHQLS ISKDKNSI
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
Arabidopsis Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.