Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g044380.2.1 | Tomato | nucleus | 61.13 | 22.37 |
| Solyc01g079390.2.1 | Tomato | nucleus | 34.42 | 13.99 |
| VIT_05s0049g02100.t01 | Wine grape | cytosol | 1.78 | 6.67 |
| Solyc09g098250.2.1 | Tomato | nucleus | 9.2 | 4.21 |
| Solyc02g093200.2.1 | Tomato | endoplasmic reticulum, vacuole | 4.45 | 3.24 |
| Solyc03g083410.2.1 | Tomato | mitochondrion, nucleus | 6.82 | 2.34 |
| Solyc01g095890.2.1 | Tomato | nucleus | 7.12 | 2.29 |
| Solyc01g006880.2.1 | Tomato | nucleus | 6.23 | 1.32 |
| Solyc03g112690.1.1 | Tomato | nucleus | 2.08 | 1.09 |
| Solyc06g059960.2.1 | Tomato | nucleus | 4.75 | 0.96 |
| Solyc04g057880.2.1 | Tomato | nucleus | 2.97 | 0.72 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 0.89 | 0.67 |
| Solyc07g008580.1.1 | Tomato | nucleus | 0.3 | 0.36 |
| Solyc09g098260.1.1 | Tomato | nucleus | 0.3 | 0.17 |
| Solyc07g006060.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc07g008460.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc07g008500.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc09g060000.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc12g100290.1.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0031519 |
| GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_EZ | InterPro:IPR025778 | UniProt:K4BDB5 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF237 | EnsemblPlantsGene:Solyc02g093190.2 | EnsemblPlants:Solyc02g093190.2.1 | UniParc:UPI0002768317 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:+:54130751..54136234
Molecular Weight (calculated)
37771.2 Da
IEP (calculated)
4.298
GRAVY (calculated)
-0.463
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTSSIRIG QLTIDLPIGA AEGTTIEADE FLSVTESLKQ QFASKRADYV KKRTEENAQK AYDLGELFLK LSTERKNHTV HGADSSIDLL SKRQQDVINM
101: QTGIGSSNGD NDSNSSEDDG YASSEIRLGS SIAIKSAVCP IILPQVERLP QYTTWVFLDR NQQMPMNQSV VGCRRIYYDK NSGEALICSD SEEELLEGEQ
201: EKKFAEYEDV MLCSTIQQIG LSDTVLELLG QFLSRKPSEV KERYEDLVKD KYECASKNEN IQGTPDLFLD NDLDAALDSF DTLFCRRCLV FDCQSHGCSQ
301: DLIFPAEKQL PWCSPDVDKE PCCSNCYRLV SWSPSFM
101: QTGIGSSNGD NDSNSSEDDG YASSEIRLGS SIAIKSAVCP IILPQVERLP QYTTWVFLDR NQQMPMNQSV VGCRRIYYDK NSGEALICSD SEEELLEGEQ
201: EKKFAEYEDV MLCSTIQQIG LSDTVLELLG QFLSRKPSEV KERYEDLVKD KYECASKNEN IQGTPDLFLD NDLDAALDSF DTLFCRRCLV FDCQSHGCSQ
301: DLIFPAEKQL PWCSPDVDKE PCCSNCYRLV SWSPSFM
001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
Arabidopsis Description
CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.