Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc02g093200.2.1 | Tomato | endoplasmic reticulum, vacuole | 45.56 | 8.86 |
VIT_07s0031g00320.t01 | Wine grape | nucleus | 65.56 | 6.76 |
VIT_07s0005g01490.t01 | Wine grape | nucleus | 48.89 | 5.09 |
HORVU0Hr1G020960.1 | Barley | nucleus | 8.89 | 1.87 |
Solyc02g093190.2.1 | Tomato | nucleus | 6.67 | 1.78 |
VIT_16s0039g00740.t01 | Wine grape | mitochondrion | 8.89 | 1.76 |
VIT_18s0072g00220.t01 | Wine grape | nucleus | 6.67 | 1.62 |
VIT_18s0072g00210.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 6.67 | 1.6 |
VIT_18s0072g00200.t01 | Wine grape | nucleus | 6.67 | 1.17 |
VIT_11s0037g00880.t01 | Wine grape | nucleus | 4.44 | 0.81 |
VIT_18s0001g01700.t01 | Wine grape | nucleus | 8.89 | 0.77 |
Os01t0218900-01 | Rice | nucleus | 3.33 | 0.74 |
VIT_04s0008g06180.t01 | Wine grape | nucleus | 7.78 | 0.62 |
CDX95184 | Canola | cytosol | 6.67 | 0.53 |
VIT_15s0046g00760.t01 | Wine grape | nucleus | 4.44 | 0.38 |
VIT_16s0098g00350.t01 | Wine grape | nucleus | 4.44 | 0.37 |
VIT_05s0124g00250.t01 | Wine grape | nucleus | 4.44 | 0.37 |
VIT_00s0429g00030.t01 | Wine grape | nucleus | 2.22 | 0.18 |
VIT_16s0022g01290.t01 | Wine grape | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
ArrayExpress:VIT_05s0049g02100 | EMBL:FN595496 | EnsemblPlants:VIT_05s0049g02100.t01 | EnsemblPlantsGene:VIT_05s0049g02100 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0031519 | InterPro:CXC_dom | InterPro:Hist-Lys_N-MeTrfase_EZ | InterPro:IPR025778 |
InterPro:IPR026489 | KEGG:00310+2.1.1.43 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF237 | PFscan:PS51633 | ProteinID:CCB48632 |
ProteinID:CCB48632.1 | SEG:seg | UniParc:UPI000210902D | UniProt:F6H8T3 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5:-:9733969..9734356
Molecular Weight (calculated)
10029.0 Da
IEP (calculated)
4.556
GRAVY (calculated)
-0.119
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MGYAVENTVD ALRVARIDLE VAIVLKVSAE CRQCPCFAAD RECEPDVCRS CWISCGDGTL GVLSQRGDNY ECRNMKLLLQ QQQKASAWEV
001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
Arabidopsis Description
CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.