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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g093200.2.1 Tomato endoplasmic reticulum, vacuole 45.56 8.86
VIT_07s0031g00320.t01 Wine grape nucleus 65.56 6.76
VIT_07s0005g01490.t01 Wine grape nucleus 48.89 5.09
HORVU0Hr1G020960.1 Barley nucleus 8.89 1.87
Solyc02g093190.2.1 Tomato nucleus 6.67 1.78
VIT_16s0039g00740.t01 Wine grape mitochondrion 8.89 1.76
VIT_18s0072g00220.t01 Wine grape nucleus 6.67 1.62
VIT_18s0072g00210.t01 Wine grape endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 6.67 1.6
VIT_18s0072g00200.t01 Wine grape nucleus 6.67 1.17
VIT_11s0037g00880.t01 Wine grape nucleus 4.44 0.81
VIT_18s0001g01700.t01 Wine grape nucleus 8.89 0.77
Os01t0218900-01 Rice nucleus 3.33 0.74
VIT_04s0008g06180.t01 Wine grape nucleus 7.78 0.62
CDX95184 Canola cytosol 6.67 0.53
VIT_15s0046g00760.t01 Wine grape nucleus 4.44 0.38
VIT_16s0098g00350.t01 Wine grape nucleus 4.44 0.37
VIT_05s0124g00250.t01 Wine grape nucleus 4.44 0.37
VIT_00s0429g00030.t01 Wine grape nucleus 2.22 0.18
VIT_16s0022g01290.t01 Wine grape cytosol, nucleus, plastid 0.0 0.0
Protein Annotations
ArrayExpress:VIT_05s0049g02100EMBL:FN595496EnsemblPlants:VIT_05s0049g02100.t01EnsemblPlantsGene:VIT_05s0049g02100GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0031519InterPro:CXC_domInterPro:Hist-Lys_N-MeTrfase_EZInterPro:IPR025778
InterPro:IPR026489KEGG:00310+2.1.1.43PANTHER:PTHR22884PANTHER:PTHR22884:SF237PFscan:PS51633ProteinID:CCB48632
ProteinID:CCB48632.1SEG:segUniParc:UPI000210902DUniProt:F6H8T3MapMan:35.1:
Description
No Description!
Coordinates
chr5:-:9733969..9734356
Molecular Weight (calculated)
10029.0 Da
IEP (calculated)
4.556
GRAVY (calculated)
-0.119
Length
90 amino acids
Sequence
(BLAST)
1: MGYAVENTVD ALRVARIDLE VAIVLKVSAE CRQCPCFAAD RECEPDVCRS CWISCGDGTL GVLSQRGDNY ECRNMKLLLQ QQQKASAWEV
Best Arabidopsis Sequence Match ( AT2G23380.1 )
(BLAST)
001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
Arabidopsis Description
CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.