Factsheet for VIT_15s0046g00760.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	4.61	88.89
Os01t0655300-01	Rice	cytosol, nucleus	4.03	80.77
KRH47912	Soybean	nucleus	57.68	60.77
KRH06474	Soybean	nucleus	57.39	60.59
VIT_16s0098g00350.t01	Wine grape	nucleus	60.75	58.67
Solyc01g095890.2.1	Tomato	nucleus	58.73	58.4
GSMUA_Achr10P...	Banana	nucleus	54.32	58.05
KRH68208	Soybean	nucleus	53.45	56.66
CDY25072	Canola	nucleus	52.4	55.89
GSMUA_Achr2P06290_001	Banana	nucleus	50.77	55.74
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	52.69	55.68
PGSC0003DMT400023546	Potato	nucleus	37.52	55.54
CDX67860	Canola	nucleus	50.58	54.67
AT3G61740.1	Thale cress	nucleus	52.98	54.22
GSMUA_Achr8P28030_001	Banana	nucleus	51.15	53.35
OQU87254	Sorghum	nucleus	45.2	53.1
Zm00001d044020_P001	Maize	cytosol	12.48	50.78
TraesCS3D01G237600.2	Wheat	nucleus	47.89	48.83
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	47.79	48.59
Zm00001d011490_P003	Maize	nucleus	48.37	48.55
TraesCS3B01G265800.1	Wheat	nucleus	47.89	48.54
TraesCS3A01G237200.2	Wheat	nucleus	47.7	48.35
Bra003467.1-P	Field mustard	nucleus	47.98	48.31
VIT_05s0124g00250.t01	Wine grape	nucleus	23.42	22.51
VIT_18s0072g00220.t01	Wine grape	nucleus	6.72	18.92
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	6.33	17.6
VIT_11s0037g00880.t01	Wine grape	nucleus	8.16	17.21
VIT_16s0039g00740.t01	Wine grape	mitochondrion	6.62	15.2
VIT_07s0031g00320.t01	Wine grape	nucleus	10.94	13.06
VIT_18s0072g00200.t01	Wine grape	nucleus	6.33	12.82
VIT_07s0005g01490.t01	Wine grape	nucleus	10.17	12.25
VIT_04s0008g06180.t01	Wine grape	nucleus	12.57	11.56
VIT_00s0429g00030.t01	Wine grape	nucleus	7.2	6.76
VIT_18s0001g01700.t01	Wine grape	nucleus	6.33	6.33
VIT_05s0049g02100.t01	Wine grape	cytosol	0.38	4.44

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100246631	wikigene:100246631	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140
Gene3D:3.30.40.10	ProteinID:CCB62524	ProteinID:CCB62524.1	InterPro:EPHD	UniProt:F6I6C8	EMBL:FN596755
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	GO:GO:0046872	GO:GO:0051571	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	EntrezGene:LOC100246631
wikigene:LOC100246631	PFAM:PF00628	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF92	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom
SMART:SM00249	SMART:SM00293	SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748
SUPFAM:SSF82199	TIGR:TC63948	UniParc:UPI0002109C14	ArrayExpress:VIT_15s0046g00760	EnsemblPlantsGene:VIT_15s0046g00760	EnsemblPlants:VIT_15s0046g00760.t01
unigene:Vvi.19260	RefSeq:XP_002278335	RefSeq:XP_002278335.2	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I6C8]

Coordinates

chr15:+:17677646..17689523

Molecular Weight (calculated)

117464.0 Da

IEP (calculated)

8.050

GRAVY (calculated)

-0.586

Length

1042 amino acids

Sequence
(BLAST)

0001: MPQIKRCKLE QPGDDVASLI KPKKRRIDGN GPADTPGNVE EDSIVAGSLC TEISYCASEV ESNSKGKRKG RNPKAEGSRP PLLPSSRGRH RALPSRFNDS
0101: IIDSWTKEDS KADDMESNLD DFEVVVYEKE RIGTGRQKTG ALRLEKQHKE ETFRLPSSNL YGLCEKAEEG EAGYVGFRES ESKKYSCSHS SLSSLHDGLN
0201: PLVEASDYPG FNSKGREKAG KDKTEKRKDF YRPEEFVLGD IVWAKSGKRY PAWPAIVIDP VFEAPEAVLS SCVADAICVM FFGYSKNGKQ RDYAWVKHGM
0301: IFPFLEYLDR FQGQTQLHKS KPSDFREAIE EAFLAENGFF DTNNGSGQLS RTEENPVGVE EATGSNQDQE SHSQNQGVFN NGEAQPCDGC GCVLPCKSSK
0401: KMNNSTGETQ LLCKHCAKLR KSKQFCGVCK KTWHHSDGGN WVCCDGCNVW VHAECEKIST KRLKDLEDID YYCPDCKAKF NFELSDSDKW QPKVKCIENN
0501: GPPVLPDKLA VVCTGMEGIY LPNLHVVVCK CGSCGTRKQT LSEWERHTGS RAKKWKASVK VKDSLIPLEK WLAEYTTHGI NPLKLQKQQL FSFLKEKYEP
0601: VHAKWTTERC AICRWVEDWD YNKMIICNRC QIAVHQECYG ARNVKDFTSW VCRACETPDA KRECCLCPVK GGALKPTDVE GLWVHVTCAW FRPEVAFLND
0701: EKMEPAVGIL RIPSTSFLKV CVICKQTHGS CTQCCKCATY FHAMCASRAG YSMELHCGEK NGRQITKKLS YCAVHRAPNA DTVLVVRTPS GVFSARNRQN
0801: QKRDQSFRGS RLVSSRRPEL PVSLALETNE LEPLSAGRCR VFKRSINNVG AGAIFHRLMG PRHHSLDAID GLSLYKELED PQTFSSFKER LYHLQRTENH
0901: RVCFGKSGIH GWGLFARRSI QEGEMVIEYR GEQVRRSVAD LREAKYRLEG KDCYLFKISE EVVIDATNKG NIARLINHSC FPNCYARIMS VGDEESRIVL
1001: IAKINVSAGD ELTYDYLFDP DERDESKVPC LCGAPNCRKF MN

Best Arabidopsis Sequence Match ( AT5G53430.1 )
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Arabidopsis Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.