Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25072 | Canola | nucleus | 92.63 | 91.4 |
| Bra003467.1-P | Field mustard | nucleus | 92.53 | 86.18 |
| AT3G61740.1 | Thale cress | nucleus | 78.63 | 74.46 |
| Os01t0655300-01 | Rice | cytosol, nucleus | 3.84 | 71.15 |
| KRH47912 | Soybean | nucleus | 56.02 | 54.6 |
| KRH06474 | Soybean | nucleus | 55.81 | 54.51 |
| VIT_15s0046g00760.t01 | Wine grape | nucleus | 54.67 | 50.58 |
| KRH68208 | Soybean | nucleus | 50.1 | 49.14 |
| KRG96460 | Soybean | cytosol, mitochondrion, nucleus, plastid | 48.86 | 47.77 |
| Solyc01g095890.2.1 | Tomato | nucleus | 51.56 | 47.42 |
| Zm00001d044020_P001 | Maize | cytosol | 12.55 | 47.27 |
| GSMUA_Achr10P... | Banana | nucleus | 47.72 | 47.18 |
| CDY29869 | Canola | mitochondrion | 46.68 | 47.02 |
| GSMUA_Achr2P06290_001 | Banana | nucleus | 45.44 | 46.15 |
| CDY35655 | Canola | nucleus | 44.4 | 43.94 |
| OQU87254 | Sorghum | nucleus | 40.35 | 43.86 |
| CDY14381 | Canola | nucleus | 43.98 | 43.53 |
| CDX92851 | Canola | mitochondrion | 41.29 | 43.45 |
| GSMUA_Achr8P28030_001 | Banana | nucleus | 44.19 | 42.64 |
| PGSC0003DMT400023546 | Potato | nucleus | 31.02 | 42.47 |
| HORVU3Hr1G059080.11 | Barley | cytosol, mitochondrion, nucleus, plastid | 43.98 | 41.37 |
| TraesCS3D01G237600.2 | Wheat | nucleus | 43.67 | 41.19 |
| TraesCS3A01G237200.2 | Wheat | nucleus | 43.78 | 41.05 |
| TraesCS3B01G265800.1 | Wheat | nucleus | 43.67 | 40.95 |
| Zm00001d011490_P003 | Maize | nucleus | 43.88 | 40.75 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 5.6 | 21.01 |
| CDY06182 | Canola | nucleus | 23.03 | 20.9 |
| CDY15398 | Canola | nucleus | 22.1 | 20.6 |
| CDY19078 | Canola | nucleus | 21.78 | 20.39 |
| CDY10007 | Canola | nucleus | 22.61 | 19.59 |
| CDX98400 | Canola | nucleus | 6.12 | 18.38 |
| CDX67818 | Canola | nucleus | 6.02 | 18.07 |
| CDX83438 | Canola | cytosol | 6.85 | 17.89 |
| CDY41194 | Canola | nucleus | 6.33 | 17.58 |
| CDX79778 | Canola | cytosol | 6.64 | 17.53 |
| CDX95590 | Canola | nucleus | 6.43 | 16.99 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 6.64 | 16.98 |
| CDY15252 | Canola | nucleus | 7.78 | 16.93 |
| CDX71856 | Canola | nucleus | 6.22 | 16.67 |
| CDY23260 | Canola | nucleus | 8.2 | 15.99 |
| CDY36467 | Canola | nucleus | 8.09 | 15.76 |
| CDX95185 | Canola | endoplasmic reticulum, nucleus | 7.99 | 15.75 |
| CDX88310 | Canola | nucleus | 6.95 | 14.53 |
| CDX87571 | Canola | nucleus | 6.95 | 14.53 |
| CDX89960 | Canola | nucleus | 8.51 | 12.85 |
| CDY32472 | Canola | nucleus | 7.99 | 11.98 |
| CDY37467 | Canola | nucleus | 8.2 | 11.9 |
| CDY22021 | Canola | nucleus | 10.48 | 11.85 |
| CDY07102 | Canola | nucleus | 10.17 | 11.45 |
| CDY38942 | Canola | nucleus, plastid | 10.27 | 10.92 |
| CDX89569 | Canola | nucleus, plastid | 10.17 | 10.77 |
| CDY17381 | Canola | nucleus | 9.23 | 10.58 |
| CDY52297 | Canola | nucleus | 10.89 | 8.15 |
| CDX87527 | Canola | nucleus | 8.92 | 5.19 |
| CDX88357 | Canola | nucleus | 8.71 | 5.07 |
| CDX95184 | Canola | cytosol | 4.67 | 3.99 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.5 | Gene3D:2.170.270.10 | Gene3D:2.30.30.140 | Gene3D:3.30.40.10 | GO:A0A078BTA5 |
| EnsemblPlants:CDX67860 | ProteinID:CDX67860 | ProteinID:CDX67860.1 | InterPro:EPHD | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00099060001 | InterPro:Hist-Lys_N-MeTrfase_ATX | InterPro:IPR000313 | InterPro:IPR001214 | InterPro:IPR003616 |
| InterPro:IPR013083 | InterPro:IPR019787 | InterPro:IPR025780 | InterPro:IPR034732 | PFAM:PF00628 | PFAM:PF00855 |
| PFAM:PF00856 | PFAM:PF13831 | PFAM:PF13832 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS50280 |
| PFscan:PS50812 | PFscan:PS50868 | PFscan:PS51566 | PFscan:PS51805 | PANTHER:PTHR13793 | PANTHER:PTHR13793:SF92 |
| InterPro:PWWP_dom | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00249 | SMART:SM00293 | SMART:SM00317 |
| SMART:SM00508 | SUPFAM:SSF57903 | SUPFAM:SSF63748 | SUPFAM:SSF82199 | UniParc:UPI0004EEAAF3 | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaA07g19000D
Coordinates
chrLK031787:-:2643955..2649627
Molecular Weight (calculated)
108522.0 Da
IEP (calculated)
7.646
GRAVY (calculated)
-0.534
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MILKRTLTFE EQNLKRCKVG SEIEYGGKKG EIIVYRRRNR ASVDQPPCRE EAEDCTTSSA GSLTSKESQD QSKSLRGRVR VAPSRFNDSV VDAWGNRRRK
101: VESKESGRDD EVRVVKKVKG GHGKSAENGS SRKDNGDSSE VDFDGKDANL RSFAESGMPK DPAAMRKGVY RPEDFAVGDL VWAKCGKRFP AWPGKVIDPD
201: SQAPDSVLKH CVPGSLCVMF FGYSKNGTQR DYGWIRQGMM FPFTEFMEKF QDQTNFYNNK ASDFKKALEE AVLAENGVEG SCGAAEISCP ESSATESDQE
301: HGTASQFCSG SCHVDVRTCD GCGTVMQKSQ PEELLCKHCS KLWKSNQYCG ICKRSWHSSD GEDWVCCDGC DIWVHAGCDN ISNERFKELE HSNYHCPGCR
401: AQHECAPTVL NEQSPTVLNE QNSVFESTEK ATETELADEV TVVCNGMEGT YIRKFHVIEC KCGSCGARKQ SPSEWERHTG CRAKKWKYSV KVKDTTLTLE
501: KWIAGCSALP LEQGTADCRV LDKQMMLSLL EEKYEPVNAK WTTERCAVCR WVEDWEENKM IICNRCQVAV HQECYGVSKA QDLTSWVCRA CETPDIEREC
601: CLCPVKGGAL KPSDVEGLWV HVTCAWFRPE VGFLNHEHME PAVGLFKIPV NSFLKFCRIC KQTHGSCVQC CKCATHFHVM CASRAGYSME MHCVEKDGVQ
701: RTRKSIYCAF HRKPDPNSNV VVHTPSGVFG SRNLLQNQNG RIKGSRLVLT KKMKLPDSDI HPQTEKSHGS LSAARCRIYI CYCCCFRSLS FRAPFVFIEA
801: DTSGFTSFKE RLKHLQRTEN LRVCFGKSGI HGWGLFARRS IQEGEMIIEY RGVKVRRSVA DLREANYRAQ GKDCYLFKIS EEIVIDATNS GNIARLINHS
901: CMPNCYARIV SIGDGEENRI VLIAKTNVSP GEELTYDYLF EVDESEEIKV PCLCRAPNCR KFMN
101: VESKESGRDD EVRVVKKVKG GHGKSAENGS SRKDNGDSSE VDFDGKDANL RSFAESGMPK DPAAMRKGVY RPEDFAVGDL VWAKCGKRFP AWPGKVIDPD
201: SQAPDSVLKH CVPGSLCVMF FGYSKNGTQR DYGWIRQGMM FPFTEFMEKF QDQTNFYNNK ASDFKKALEE AVLAENGVEG SCGAAEISCP ESSATESDQE
301: HGTASQFCSG SCHVDVRTCD GCGTVMQKSQ PEELLCKHCS KLWKSNQYCG ICKRSWHSSD GEDWVCCDGC DIWVHAGCDN ISNERFKELE HSNYHCPGCR
401: AQHECAPTVL NEQSPTVLNE QNSVFESTEK ATETELADEV TVVCNGMEGT YIRKFHVIEC KCGSCGARKQ SPSEWERHTG CRAKKWKYSV KVKDTTLTLE
501: KWIAGCSALP LEQGTADCRV LDKQMMLSLL EEKYEPVNAK WTTERCAVCR WVEDWEENKM IICNRCQVAV HQECYGVSKA QDLTSWVCRA CETPDIEREC
601: CLCPVKGGAL KPSDVEGLWV HVTCAWFRPE VGFLNHEHME PAVGLFKIPV NSFLKFCRIC KQTHGSCVQC CKCATHFHVM CASRAGYSME MHCVEKDGVQ
701: RTRKSIYCAF HRKPDPNSNV VVHTPSGVFG SRNLLQNQNG RIKGSRLVLT KKMKLPDSDI HPQTEKSHGS LSAARCRIYI CYCCCFRSLS FRAPFVFIEA
801: DTSGFTSFKE RLKHLQRTEN LRVCFGKSGI HGWGLFARRS IQEGEMIIEY RGVKVRRSVA DLREANYRAQ GKDCYLFKIS EEIVIDATNS GNIARLINHS
901: CMPNCYARIV SIGDGEENRI VLIAKTNVSP GEELTYDYLF EVDESEEIKV PCLCRAPNCR KFMN
0001: MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS
0101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
0201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
0301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
0401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
0501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
0601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
0701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK IDLEAISHRL
0801: KGPSHHSLSA IENLNSFKAS FSFRAPFMSV FCFLGATFSE YLRKILISIY LVTHQEADFT SFRERLKHLQ RTENFRVCFG KSGIHGWGLF ARKSIQEGEM
0901: IIEYRGVKVR RSVADLREAN YRSQGKDCYL FKISEEIVID ATDSGNIARL INHSCMPNCY ARIVSMGDGE DNRIVLIAKT NVAAGEELTY DYLFEVDESE
1001: EIKVPCLCKA PNCRKFMN
0101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
0201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
0301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
0401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
0501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
0601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
0701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK IDLEAISHRL
0801: KGPSHHSLSA IENLNSFKAS FSFRAPFMSV FCFLGATFSE YLRKILISIY LVTHQEADFT SFRERLKHLQ RTENFRVCFG KSGIHGWGLF ARKSIQEGEM
0901: IIEYRGVKVR RSVADLREAN YRSQGKDCYL FKISEEIVID ATDSGNIARL INHSCMPNCY ARIVSMGDGE DNRIVLIAKT NVAAGEELTY DYLFEVDESE
1001: EIKVPCLCKA PNCRKFMN
Arabidopsis Description
ATX3Histone-lysine N-methyltransferase ATX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M364]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.