CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67860	Canola	nucleus	91.4	92.63
Bra003467.1-P	Field mustard	nucleus	88.95	83.96
AT3G61740.1	Thale cress	nucleus	78.71	75.54
Os01t0655300-01	Rice	cytosol, nucleus	3.79	71.15
KRH47912	Soybean	nucleus	56.81	56.12
KRH06474	Soybean	nucleus	56.5	55.93
VIT_15s0046g00760.t01	Wine grape	nucleus	55.89	52.4
KRH68208	Soybean	nucleus	50.87	50.56
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	50.05	49.59
Solyc01g095890.2.1	Tomato	nucleus	52.1	48.57
GSMUA_Achr10P...	Banana	nucleus	48.41	48.51
CDY29869	Canola	mitochondrion	47.49	48.48
Zm00001d044020_P001	Maize	cytosol	12.49	47.66
GSMUA_Achr2P06290_001	Banana	nucleus	46.16	47.52
OQU87254	Sorghum	nucleus	40.94	45.1
CDY35655	Canola	nucleus	44.93	45.07
CDY14381	Canola	nucleus	44.63	44.76
CDX92851	Canola	mitochondrion	41.97	44.76
GSMUA_Achr8P28030_001	Banana	nucleus	45.04	44.04
PGSC0003DMT400023546	Potato	nucleus	31.73	44.03
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	44.52	42.44
TraesCS3D01G237600.2	Wheat	nucleus	44.11	42.17
TraesCS3A01G237200.2	Wheat	nucleus	44.22	42.02
TraesCS3B01G265800.1	Wheat	nucleus	44.11	41.93
Zm00001d011490_P003	Maize	nucleus	44.11	41.52
CDY06182	Canola	nucleus	23.23	21.37
CDX67669	Canola	cytosol, nucleus, plastid	5.53	21.01
CDY15398	Canola	nucleus	22.11	20.89
CDY19078	Canola	nucleus	21.9	20.78
CDY10007	Canola	nucleus	22.82	20.04
CDX98400	Canola	nucleus	6.04	18.38
CDX67818	Canola	nucleus	5.94	18.07
CDX83438	Canola	cytosol	6.76	17.89
CDY41194	Canola	nucleus	6.24	17.58
CDX79778	Canola	cytosol	6.55	17.53
CDX95590	Canola	nucleus	6.35	16.99
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.55	16.98
CDY15252	Canola	nucleus	7.68	16.93
CDX71856	Canola	nucleus	6.14	16.67
CDX95185	Canola	endoplasmic reticulum, nucleus	8.19	16.36
CDY23260	Canola	nucleus	8.19	16.19
CDY36467	Canola	nucleus	8.09	15.96
CDX88310	Canola	nucleus	6.86	14.53
CDX87571	Canola	nucleus	6.86	14.53
CDX89960	Canola	nucleus	8.39	12.85
CDY32472	Canola	nucleus	7.68	11.66
CDY22021	Canola	nucleus	10.13	11.62
CDY37467	Canola	nucleus	7.78	11.45
CDY07102	Canola	nucleus	9.93	11.33
CDY38942	Canola	nucleus, plastid	10.13	10.92
CDX89569	Canola	nucleus, plastid	10.03	10.77
CDY17381	Canola	nucleus	8.9	10.34
CDY52297	Canola	nucleus	10.75	8.15
CDX87527	Canola	nucleus	8.5	5.01
CDX88357	Canola	nucleus	8.29	4.89
CDX95184	Canola	cytosol	4.61	3.99

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	GO:A0A078GIS8
UniProt:A0A078GIS8	EnsemblPlants:CDY25072	ProteinID:CDY25072	ProteinID:CDY25072.1	InterPro:EPHD	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00028914001	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	PFAM:PF00628	PFAM:PF00855
PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280
PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF92
InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00293	SMART:SM00317
SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI0004EDCE9B	InterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

BnaC06g18140DHistone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GIS8]

Coordinates

chrLK032168:-:153576..159675

Molecular Weight (calculated)

110011.0 Da

IEP (calculated)

7.827

GRAVY (calculated)

-0.577

Length

977 amino acids

Sequence
(BLAST)

001: MILKRTLTFE EQNLKRCKVG SEIEYGGKKG EIIVYRRRNR ASVDQPPCRE EAEDCCTSSA GSLTSKEYRD QSKSSRGRVR VAPSRFNDSV VDAWGNRRHK
101: VEKKESGRDD EVRVVKKLKG GQGGEKGSSE LFPRKDNGDS SEVDFDDLGK DEFFAESGKP KDSAVMRKGV YRPEDFAVGD LVWAKCGKRF PAWPGKVIDP
201: DSQAPDSVLK HCVPGSLCVM FFGYSKNGAQ RDYGWIRRGM MFPFTEFMDK FQDQTNFYNN KASDFKKALE EAVLAENGIE GSCGAAEISC PESSATQSDQ
301: EHGPAYRSQA PSILTCDGCG TVMHESQPEE LLCKHCAKLW KSNQYCGICK RSWHSSDGED WVCCDGCDIW VHAGCDNISN KRFKELEHSN YHCPDCRAQH
401: ECAPTVLNEQ SPTVVNEQNT LFNSTEKATE TELADEVTVV CNGMEGTYIR KFHVIECKCG SCGARKQSPS EWERHTGCRA KKWKYSVKVK DTTLTLEKWI
501: AGCTALPLEQ GTADCRVLDK QMMLSLLEEK YEPVNAKWTT ERCAVCRWVE DWEENKMIIC NRCQVAVHQE CYGVSKAQDL TSWVCRACET PDIERECCLC
601: PVKGGALKPS DVEGLWVHVT CAWFRPEVGF LNHEHMEPAV GLFKIPVNSF LKFCRICKQT HGSCVQCCKC ATHFHVLCAS RAGYSMEMHC VEKDGVQRTR
701: KSIYCAFHRK PDPNSNVVVH TPSGVFGSRN LLQNQNGRIK GSRLVLTKKM KLPGSDIQPQ TEQSHGSLSA ARCRIYSRSN TKKVDLEAIP HRLKGPSHHS
801: LGAIENLNSF KATDTSGFTS FKERLKHLQK TENLRVCFGK SGIHGWGLFA RRSIQEGEMI IEYRGVKVRR SVADLREANY RAQGKDCYLF KISEEIVIDA
901: TNSGNIARLI NHSCMPNCYA RIVSIGDGEE NRIVLIAKTN VSPGEELTYD YLFEVDESEE IKVPCLCRAP NCRKFMN

Best Arabidopsis Sequence Match ( AT3G61740.2 )
(BLAST)

001: MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS
101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK KIDLEAISHR
801: LKGPSHHSLS AIENLNSFKE ADFTSFRERL KHLQRTENFR VCFGKSGIHG WGLFARKSIQ EGEMIIEYRG VKVRRSVADL REANYRSQGK DCYLFKISEE
901: IVIDATDSGN IARLINHSCM PNCYARIVSM GDGEDNRIVL IAKTNVAAGE ELTYDYLFEV DESEEIKVPC LCKAPNCRKF MN

Arabidopsis Description

ATX3Histone-lysine N-methyltransferase ATX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M364]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.