Factsheet for Zm00001d011490_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87254	Sorghum	nucleus	79.0	92.45
Os01t0655300-01	Rice	cytosol, nucleus	4.62	92.31
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	4.34	83.33
Zm00001d044020_P001	Maize	cytosol	20.52	83.2
TraesCS3D01G237600.2	Wheat	nucleus	76.2	77.4
TraesCS3A01G237200.2	Wheat	nucleus	76.49	77.24
TraesCS3B01G265800.1	Wheat	nucleus	76.49	77.24
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	75.72	76.68
GSMUA_Achr2P06290_001	Banana	nucleus	52.79	57.74
GSMUA_Achr8P28030_001	Banana	nucleus	50.67	52.65
CDY29869	Canola	mitochondrion	47.78	51.83
AT4G27910.1	Thale cress	nucleus	50.1	50.63
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	47.21	49.95
CDX92851	Canola	mitochondrion	44.03	49.89
Bra040838.1-P	Field mustard	mitochondrion, nucleus	44.51	49.57
CDY35655	Canola	nucleus	45.95	48.97
KRH47912	Soybean	nucleus	46.53	48.84
Bra003056.1-P	Field mustard	nucleus	34.01	48.82
CDY14381	Canola	nucleus	45.76	48.77
KRH64461	Soybean	nucleus	49.71	48.68
VIT_16s0098g00350.t01	Wine grape	nucleus	50.48	48.56
VIT_15s0046g00760.t01	Wine grape	nucleus	48.55	48.37
AT5G53430.1	Thale cress	nucleus	48.55	48.32
KRH53486	Soybean	nucleus	49.61	48.27
KRH06474	Soybean	nucleus	45.86	48.23
PGSC0003DMT400023546	Potato	nucleus	31.5	46.45
Solyc01g095890.2.1	Tomato	nucleus	46.34	45.9
Zm00001d008941_P002	Maize	plastid	42.68	44.97
CDY25072	Canola	nucleus	41.52	44.11
CDX67860	Canola	nucleus	40.75	43.88
KRH68208	Soybean	nucleus	40.85	43.13
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	40.37	42.49
AT3G61740.1	Thale cress	nucleus	41.52	42.34
Bra003467.1-P	Field mustard	nucleus	38.15	38.26
Zm00001d039355_P010	Maize	plastid	37.09	26.98
Zm00001d019907_P003	Maize	nucleus	21.58	21.31
Zm00001d051057_P002	Maize	nucleus	8.48	18.64
Zm00001d005563_P006	Maize	nucleus	6.07	18.58
Zm00001d020038_P001	Maize	nucleus	5.97	17.42
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	7.03	14.63
Zm00001d003679_P006	Maize	nucleus	6.26	12.67
Zm00001d036296_P004	Maize	nucleus, plastid	10.31	10.87
Zm00001d023333_P025	Maize	nucleus	9.92	9.07
Zm00001d047636_P002	Maize	nucleus	7.51	8.78
Zm00001d006323_P069	Maize	nucleus	13.39	7.1
Zm00001d028890_P002	Maize	nucleus	7.23	6.75
Zm00001d016804_P002	Maize	nucleus	10.21	5.91

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	UniProt:A0A1D6G0P9
ProteinID:AQK97044.1	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	GO:GO:0051571	InterPro:Hist-Lys_N-MeTrfase_ATX
InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780
InterPro:IPR034732	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359
PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805
PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249
SMART:SM00317	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI000842B77D	InterPro:Zinc_finger_PHD-type_CS
EnsemblPlantsGene:Zm00001d011490	EnsemblPlants:Zm00001d011490_P003	EnsemblPlants:Zm00001d011490_T003	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

arabidopsis trithorax homolog5Histone-lysine N-methyltransferase ATX3

Coordinates

chr8:+:152111717..152120844

Molecular Weight (calculated)

118775.0 Da

IEP (calculated)

8.329

GRAVY (calculated)

-0.626

Length

1038 amino acids

Sequence
(BLAST)

0001: MIFKRSQRSE ILAPRRCNAA DSGGEDEGGG GPRPRKRRRG DEFFPVDLLG DVPASSIPYA AFGLRWSEAP EAPPEAAQPP PAARPPVVRS SRGRTLVLPS
0101: RFNDSVLTDP WKKEKPARPP PPVKTEHLAR RNELLHKKGA NFDSSVALSE VDDDDEEEAM VERYRARRSF GASRKHLASW STLTSVHDEP YSNHHRKEVK
0201: LRHYYEEDEE EEEEKEDIFH CTEELVYGDI VWAKLGKRQP MWPGVVVDPT QQAAADAMPP QPRGVAVLCV MLFGWRTEFS GEKKYVWVRQ GLIFPFSDYM
0301: NRFQGQTELS SCKPADFRRA VEEAFLADQG FSEVVVHCST KGQSVVCHSF PDDLHEVTGS NELEYQPQIK ARRIQQCRRV LQCESCGNCF PNKDTNKMVY
0401: VMEQLACRLC ARILALKKYC GICLKNLQHK YGGRRVCCHG CESWVHAECD ENCSNLKDLQ DKKYHCPYCR VKMNSTLPGK NTKISDVRKD SSAQKGSKPD
0501: KVALVCFDME GTYEPDLELI SCHCGPCKGQ KFLFNEWERH AGCRSKNWRS SIKLKGSLMP FGKWIDRHQP GVCPTNPPKR SSQKMKKQKL IDLLNDPYDP
0601: VNVKWTTERC AVCRWVEDWD YNKIVICNRC QIAVHQECYG VRGKQDFTSW VCRACEKPEQ KRECCLCPVK GGALKPTNVD NLWVHVTCAW FQSQVAFASD
0701: ELMEPAIGIL NIQPLLFMKM CVICKQIHGS CTQCYRCSTY YHAICASRAG YRMELHCLEK NGRQTTKKIS YCAQHRSPNP DNVLIIQTPA GTFSSKKLVH
0801: SNGKVAASRL IRKDIPLDLP SEVKISENLS AARCRVYVRK DLKRSREGTI VHHVRGPCQH RWEEIDNLNP PREERDPESF CTFKERLCYL QKTEHGRVCF
0901: GRSGIHRWGL FARRDIQEGE MVLEYRGEQV RRSVADLREE KYRVQGKDCY LFKISEEVVV DATDKGNVAR LINHSCTPNC YARIMSVGHD ESRIVLIAKK
1001: KVCAGDELTY DYLFDPDEAD ERKVPCLCQT ANCRKFMN

Best Arabidopsis Sequence Match ( AT4G27910.1 )
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Arabidopsis Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.