Factsheet for AT5G53430.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	4.6	88.89
CDY35655	Canola	nucleus	79.58	85.22
CDY14381	Canola	nucleus	79.48	85.11
Bra003056.1-P	Field mustard	nucleus	56.47	81.47
AT4G27910.1	Thale cress	nucleus	77.18	78.38
Os01t0655300-01	Rice	cytosol, nucleus	3.84	76.92
KRH64461	Soybean	nucleus	66.54	65.47
KRH53486	Soybean	nucleus	66.54	65.04
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	57.72	61.37
VIT_16s0098g00350.t01	Wine grape	nucleus	62.8	60.7
GSMUA_Achr2P06290_001	Banana	nucleus	50.81	55.85
GSMUA_Achr10P...	Banana	nucleus	50.53	54.05
Zm00001d044020_P001	Maize	cytosol	13.23	53.91
GSMUA_Achr8P28030_001	Banana	nucleus	49.95	52.15
OQU87254	Sorghum	nucleus	43.62	51.3
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	48.61	49.46
TraesCS3A01G237200.2	Wheat	nucleus	48.61	49.32
TraesCS3D01G237600.2	Wheat	nucleus	48.32	49.32
TraesCS3B01G265800.1	Wheat	nucleus	48.42	49.12
Zm00001d011490_P003	Maize	nucleus	48.32	48.55
AT3G61740.1	Thale cress	nucleus	46.88	48.04
AT1G05830.3	Thale cress	nucleus	22.82	21.98
AT2G31650.1	Thale cress	nucleus	21.67	21.28
AT3G59960.1	Thale cress	nucleus	6.42	20.36
AT4G30860.1	Thale cress	nucleus	8.05	16.9
AT2G44150.1	Thale cress	nucleus	5.75	16.53
AT2G23380.1	Thale cress	nucleus	11.41	13.19
AT4G02020.1	Thale cress	nucleus	10.07	12.27
AT1G02580.1	Thale cress	nucleus	7.96	12.05
AT1G76710.3	Thale cress	nucleus	5.75	11.56
AT5G42400.2	Thale cress	nucleus	10.45	7.85
AT1G77300.1	Thale cress	nucleus	9.88	5.71

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	EntrezGene:835424
ProteinID:AED96353.1	EMBL:AK117221	ArrayExpress:AT5G53430	EnsemblPlantsGene:AT5G53430	RefSeq:AT5G53430	TAIR:AT5G53430
RefSeq:AT5G53430-TAIR-G	EnsemblPlants:AT5G53430.1	TAIR:AT5G53430.1	EMBL:AY049755	ProteinID:BAA97320.1	EMBL:BT005981
ncoils:Coil	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009294	GO:GO:0009506	GO:GO:0009987
GO:GO:0016043	GO:GO:0016569	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	RefSeq:NP_200155.2	PFAM:PF00628
PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	InterPro:Post-SET_dom	UniProt:Q8GZ42
Symbol:SDG29	InterPro:SET_dom	SMART:SM00249	SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903
SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI0000060DE4	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]

Coordinates

chr5:+:21677146..21684122

Molecular Weight (calculated)

119129.0 Da

IEP (calculated)

8.119

GRAVY (calculated)

-0.562

Length

1043 amino acids

Sequence
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.