Factsheet for AT1G05830.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06182	Canola	nucleus	81.35	82.96
CDY10007	Canola	nucleus	80.06	77.9
AT2G31650.1	Thale cress	nucleus	70.45	71.85
VIT_05s0124g00250.t01	Wine grape	nucleus	57.8	57.75
KRH45215	Soybean	nucleus	56.97	56.71
KRH01524	Soybean	nucleus	56.97	56.71
GSMUA_Achr1P18360_001	Banana	nucleus	52.08	54.92
Os09t0134500-02	Rice	nucleus	50.23	53.23
EER96448	Sorghum	nucleus	48.38	51.37
TraesCS5B01G163000.1	Wheat	nucleus, plastid	50.05	49.91
Zm00001d019907_P003	Maize	nucleus	48.38	49.86
TraesCS5A01G165200.1	Wheat	plastid	49.86	49.72
TraesCS5D01G170100.5	Wheat	nucleus, plastid	49.77	47.7
HORVU5Hr1G051100.8	Barley	nucleus	49.77	46.91
AT3G61740.1	Thale cress	nucleus	21.51	22.89
AT5G53430.1	Thale cress	nucleus	21.98	22.82
AT4G27910.1	Thale cress	nucleus	21.42	22.59
AT3G59960.1	Thale cress	nucleus	5.63	18.54
AT2G44150.1	Thale cress	nucleus	6.09	18.18
AT4G30860.1	Thale cress	nucleus	6.09	13.28
AT1G02580.1	Thale cress	nucleus	7.57	11.9
AT1G76710.3	Thale cress	nucleus	5.54	11.56
AT4G02020.1	Thale cress	nucleus	8.86	11.21
AT2G23380.1	Thale cress	nucleus	9.14	10.98
AT5G42400.2	Thale cress	nucleus	10.06	7.85
AT1G77300.1	Thale cress	nucleus	9.42	5.65

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.160.360	Gene3D:3.30.40.10	MapMan:35.1
EntrezGene:837093	ProteinID:AAF29390.1	ProteinID:AEE27900.1	ProteinID:AEE27901.1	EMBL:AK226560	ProteinID:ANM59180.1
ProteinID:ANM59181.1	ArrayExpress:AT1G05830	EnsemblPlantsGene:AT1G05830	RefSeq:AT1G05830	TAIR:AT1G05830	RefSeq:AT1G05830-TAIR-G
EnsemblPlants:AT1G05830.3	Symbol:ATX2	Unigene:At.46306	ncoils:Coil	InterPro:EPHD	InterPro:FYrich_C
InterPro:FYrich_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016569	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0042800	GO:GO:0046872	GO:GO:0051568	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR003888	InterPro:IPR003889	InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR034732	RefSeq:NP_001077464.4
RefSeq:NP_001321563.1	RefSeq:NP_001321564.1	RefSeq:NP_172074.6	UniProt:P0CB22	PFAM:PF00855	PFAM:PF00856
PFAM:PF05964	PFAM:PF05965	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51542	PFscan:PS51543	PFscan:PS51805
PANTHER:PTHR13793	PANTHER:PTHR13793:SF126	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249
SMART:SM00293	SMART:SM00317	SMART:SM00541	SMART:SM00542	SUPFAM:SSF57903	SUPFAM:SSF63748
SUPFAM:SSF82199	UniParc:UPI0001A7B195	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

ATX2Histone-lysine N-methyltransferase ATX2 [Source:UniProtKB/Swiss-Prot;Acc:P0CB22]

Coordinates

chr1:+:1754130..1761817

Molecular Weight (calculated)

123293.0 Da

IEP (calculated)

7.933

GRAVY (calculated)

-0.550

Length

1083 amino acids

Sequence
(BLAST)

0001: MISMSCVPKE EEGEDTQIKT ELHDHAADNP VRYASLESVY SVSSSSSSLC CKTAAGSHKK VNALKLPMSD SFELQPHRRP EIVHVYCRRK RRRRRRRESF
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.