Factsheet for TraesCS5B01G163000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G165200.1	Wheat	plastid	97.97	97.97
TraesCS5D01G170100.5	Wheat	nucleus, plastid	97.42	93.63
HORVU5Hr1G051100.8	Barley	nucleus	96.69	91.38
Os09t0134500-02	Rice	nucleus	78.73	83.66
EER96448	Sorghum	nucleus	75.14	80.0
Zm00001d019907_P003	Maize	nucleus	75.05	77.55
GSMUA_Achr1P18360_001	Banana	nucleus	61.79	65.34
Bra021721.1-P	Field mustard	nucleus	45.76	51.66
CDY19078	Canola	nucleus	48.34	50.97
CDY15398	Canola	nucleus	48.34	50.77
KRH01524	Soybean	nucleus	50.46	50.37
KRH45215	Soybean	nucleus	50.18	50.09
AT1G05830.3	Thale cress	nucleus	49.91	50.05
AT2G31650.1	Thale cress	nucleus	48.9	50.0
VIT_05s0124g00250.t01	Wine grape	nucleus	49.91	50.0
CDY06182	Canola	nucleus	48.9	50.0
CDY10007	Canola	nucleus	48.34	47.17
TraesCS3B01G265800.1	Wheat	nucleus	20.07	21.21
TraesCS3B01G161800.3	Wheat	plastid	18.78	20.5
TraesCS7B01G354300.1	Wheat	nucleus	5.71	18.24
TraesCS5B01G177800.2	Wheat	nucleus	5.8	17.4
TraesCS2B01G317900.1	Wheat	nucleus	5.62	11.53
TraesCS7B01G028500.2	Wheat	nucleus	7.92	10.72
TraesCS7B01G028200.2	Wheat	nucleus	8.75	10.71
TraesCS6B01G249100.1	Wheat	nucleus	7.09	10.32
TraesCS4B01G181400.3	Wheat	nucleus, plastid	8.38	10.22
TraesCS5B01G046300.1	Wheat	nucleus, plastid	9.85	8.26
TraesCS5B01G360200.1	Wheat	plastid	11.88	6.68
TraesCS2B01G015500.1	Wheat	nucleus	8.47	5.13

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.160.360	Gene3D:3.30.40.10
InterPro:EPHD	InterPro:FYrich_C	InterPro:FYrich_N	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	GO:GO:0042054	GO:GO:0048578	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR002219
InterPro:IPR002999	InterPro:IPR003616	InterPro:IPR003888	InterPro:IPR003889	InterPro:IPR013083	InterPro:IPR019787
InterPro:IPR034732	InterPro:PE/DAG-bd	PFAM:PF00855	PFAM:PF00856	PFAM:PF05964	PFAM:PF05965
PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50081	PFscan:PS50280
PFscan:PS50812	PFscan:PS50868	PFscan:PS51542	PFscan:PS51543	PFscan:PS51805	PANTHER:PTHR13793
PANTHER:PTHR13793:SF126	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00293
SMART:SM00317	SMART:SM00333	SMART:SM00508	SMART:SM00541	SMART:SM00542	SUPFAM:SSF57903
SUPFAM:SSF63748	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS5B01G163000	EnsemblPlants:TraesCS5B01G163000.1	InterPro:Tudor	InterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	TIGR:cd15494	TIGR:cd15662
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:300386881..300397790

Molecular Weight (calculated)

121902.0 Da

IEP (calculated)

7.543

GRAVY (calculated)

-0.514

Length

1086 amino acids

Sequence
(BLAST)

0001: MLAPALSPPK RFRDATAPPN GNLPPSLNPP AIPKSPKALG CAALEERHPK PYPPAMVIAV EGSFVHQDEG EDGDHPMRYL PLGRVYSSTA PCPPPKKPRS
0101: SAAAAAGGKP PVIVYYRRRR KKPRLEEPRP SSPATAPRQP EEEEEALGRG SRRKRPLKHE LLSLGSAPPA LGADRDGEEL LGRRQPRRRG GVQKEITSAP
0201: RRRRRRSSQL EAASPSEKRW VELEIQGADP QAFVGLVCKV FWPLDDDWYK GSITAYTELT KKHSVKYDDG EAEDLTLANE RIQFSISSEE MKCLNLKFGT
0301: SNLDKKGYDE LLALAVSFHD YQGLDPDDLV WAKITGHAMW PAVIVDESNV HASRALKPIR LDQSILVQFF GTHDFARIKS KQAVPFLNGL LSSLHLKCKQ
0401: ARFSRGLEEA KEFLLTQQLP ENMLQLRKSI ENDGSDVNGQ DDAIGSCDNL SEERAEENGE DAEMTQIELG NLRVSNXGRI VSDSDHFHNK MHIWPEGYTA
0501: FRKFASVKDP HLVTSYKMEV LRNSDIKARP LFRVISEDGL QIDGSTPNAC WKEIYCRIKE KQCNAASELE GNVCQRSGSD MFGFSNPQIR QLIQELPNAR
0601: SCLKYFENGG DTLRGYRAVH VNWKDLDFCS VCDMDEEYED NLFLQCDKCR MMVHARCYGE LEPLNGVLWL CNLCRPGAPR VSPRCCLCPV TGGAMKPTTD
0701: GRWAHLACAI WIPETCLKDV KRMEPIDGLS KINKDRWKLL CSICTVAYGA CIQCSHPTCR VAYHPLCARA ADLCVELEDD DKIHLMLLEE DEDPCIRLLS
0801: YCKKHRQPST ERPSLESNLG NPAQLVQTDA ASSSGCARTE PYNFHRRRGQ QQPQVTATAS VKRLYVENMP YIVSGYCQNK VGCDTSCEPI QSVALLDAAS
0901: QEVSVNVSSM AEKYKSMKAT FRKRLAFGKS RIHGFGVFAK VAHKAGDMMI EYIGELVRPP ISDLRERRIY NSLVGAGTYM FRIDDERVID ATRAGSIAHL
1001: INHSCEPNCY SRVISVLGDE HIIIFAKRDI DPWEELTYDY RFVSNEQRLP CYCGFPKCRG VVNDVEAEVQ STKIRVTRSE LFQQKD

Best Arabidopsis Sequence Match ( AT1G05830.3 )
(BLAST)

0001: MISMSCVPKE EEGEDTQIKT ELHDHAADNP VRYASLESVY SVSSSSSSLC CKTAAGSHKK VNALKLPMSD SFELQPHRRP EIVHVYCRRK RRRRRRRESF
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES

Arabidopsis Description

ATX2Histone-lysine N-methyltransferase ATX2 [Source:UniProtKB/Swiss-Prot;Acc:P0CB22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.