Factsheet for TraesCS5D01G170100.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G163000.1	Wheat	nucleus, plastid	93.63	97.42
TraesCS5A01G165200.1	Wheat	plastid	93.45	97.24
HORVU5Hr1G051100.8	Barley	nucleus	94.42	92.86
Os09t0134500-02	Rice	nucleus	74.69	82.58
EER96448	Sorghum	nucleus	71.59	79.31
Zm00001d019907_P003	Maize	nucleus	71.5	76.88
GSMUA_Achr1P18360_001	Banana	nucleus	58.58	64.46
Bra021721.1-P	Field mustard	nucleus	43.45	51.04
CDY19078	Canola	nucleus	45.84	50.29
CDY15398	Canola	nucleus	45.93	50.19
KRH01524	Soybean	nucleus	48.32	50.18
KRH45215	Soybean	nucleus	48.05	49.91
AT1G05830.3	Thale cress	nucleus	47.7	49.77
VIT_05s0124g00250.t01	Wine grape	nucleus	47.52	49.54
AT2G31650.1	Thale cress	nucleus	46.55	49.53
CDY06182	Canola	nucleus	46.46	49.44
CDY10007	Canola	nucleus	45.93	46.63
TraesCS3D01G237600.2	Wheat	nucleus	19.29	21.33
TraesCS3D01G144300.2	Wheat	plastid	18.05	20.52
TraesCS7D01G318100.1	Wheat	nucleus	7.43	19.76
TraesCS7D01G443000.1	Wheat	nucleus	5.4	18.05
TraesCS5D01G184500.1	Wheat	nucleus	5.58	17.75
TraesCS3D01G369900.1	Wheat	plastid	6.02	15.08
TraesCS2D01G300800.1	Wheat	nucleus	5.22	11.75
TraesCS7D01G127100.2	Wheat	nucleus	8.14	10.37
TraesCS7D01G127400.1	Wheat	nucleus	7.35	10.35
TraesCS4D01G184600.3	Wheat	nucleus, plastid	7.96	10.11
TraesCS6D01G202600.1	Wheat	nucleus	6.73	9.96
TraesCS5D01G051200.1	Wheat	nucleus, plastid	9.29	8.12
TraesCS5D01G366700.1	Wheat	plastid	11.24	6.55
TraesCS2D01G007100.1	Wheat	nucleus	8.5	5.24

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.160.360	Gene3D:3.30.40.10
ncoils:Coil	InterPro:EPHD	InterPro:FYrich_C	InterPro:FYrich_N	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	GO:GO:0042054	GO:GO:0048578	InterPro:IPR000313	InterPro:IPR001214
InterPro:IPR002219	InterPro:IPR002999	InterPro:IPR003616	InterPro:IPR003888	InterPro:IPR003889	InterPro:IPR013083
InterPro:IPR019787	InterPro:IPR034732	InterPro:PE/DAG-bd	PFAM:PF00855	PFAM:PF00856	PFAM:PF05964
PFAM:PF05965	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50081
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51542	PFscan:PS51543	PFscan:PS51805
PANTHER:PTHR13793	PANTHER:PTHR13793:SF126	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249
SMART:SM00293	SMART:SM00317	SMART:SM00333	SMART:SM00508	SMART:SM00541	SMART:SM00542
SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS5D01G170100	EnsemblPlants:TraesCS5D01G170100.5	InterPro:Tudor
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	TIGR:cd15494
TIGR:cd15662	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:266758214..266769432

Molecular Weight (calculated)

126710.0 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.570

Length

1130 amino acids

Sequence
(BLAST)

0001: MHTGTGNNGR QQRRRSSQQS GGGLPRRKEI GKSPSSSAVR EIERGAEAML APALSPPKRF GDASPTPNGN LPPSLNPPAI PKSPKALGRA ALEERHPKPY
0101: PPAMVIAVEG SFVHQDEGED GDHPMRYLPL GRVYSSTAPC PPPKKPRSSA SAAAGGKPPV IVYYRRRRKK PRLEEPRPSS PATAPRQPEE EEEEEEEEAL
0201: GRGSRRKRPL KHELLSLGSA PPALGADRDG EELLGRRQPR RRGGVQKEST SAPRRRRRRS SQLEAASPSE KRWVELEIQG ADPQAFVGLV CKVFWPLDDD
0301: WYKGSITAYT ELTKKHSVKY DDGEAEDLTL ANERIQFSIS SEEMKSLNLK FGTSNLDKKG YDELLALAVS FHDYQGLDPD DLVWAKITGH AMWPAVIVDE
0401: SNVHASRALK PIRLDQSILV QFFGTHDFAR IKLKQAVPFL NGLLSSLHLK CKQARFSRGL EEAKEFLLTQ QLPENMLQLR KSIENDGSDV NGQDDAIGSC
0501: DNLSEERAEE NGEDAEMTQI ELGNLRVSNL GRIVSDSDHF HNKMHIWPEG YTAFRKFASV KDPHLVTSYK MEVLRNSDIK ARPLFRVISE DGLQIDGSTP
0601: NACWKEIYCR IKQKQCNVAS ELEGNVCQRS GSDMFGFSNP QIRQLIQELP NARSCLKYFE NGGDTLRGYR AVHVNWKDLD FCSVCDMDEE YEDNLFLQCD
0701: KCRMMVHARC YGELEPLNGV LWLCNLCRPG APRVSPRCCL CPVTGGAMKP TTDGRWAHLA CAIWIPETCL KDVKRMEPID GLSKINKDRW KLLCSICTVA
0801: YGACIQCSHP TCRVAYHPLC ARAADLCVEV NYFYDEGPCI RLLSYCKKHR QPSTERPSLE SNLGNPAQLV QTDAASSSGC ARTEPYNFHR RRGQQQPQVT
0901: ATASVKRLYV ENMPYIVSGY CQNKVGCDTS CEPIQSVALL DAASQEASVN VSSMAEKYKS MKATFRKRLA FGKSRIHGFG VFAKVAHKAG DMMIEYIGEL
1001: VRPPISDLRE RRIYNSLVGA GTYMFRIDDE RVIDATRAGS IAHLINHSCE PNCYSRVISV LGDEHIIIFA KRDIDPWEEL TYDYRFVSNE QRLPCYCGFP
1101: KCRGVVNDVE AEVQSTKIRV TRSELFQQKD

Best Arabidopsis Sequence Match ( AT1G05830.3 )
(BLAST)

0001: MISMSCVPKE EEGEDTQIKT ELHDHAADNP VRYASLESVY SVSSSSSSLC CKTAAGSHKK VNALKLPMSD SFELQPHRRP EIVHVYCRRK RRRRRRRESF
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES

Arabidopsis Description

ATX2Histone-lysine N-methyltransferase ATX2 [Source:UniProtKB/Swiss-Prot;Acc:P0CB22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.