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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G046300.1 Wheat nucleus, plastid 94.51 94.36
TraesCS5A01G042700.1 Wheat nucleus, plastid 92.58 92.43
KXG22920 Sorghum nucleus 53.6 61.0
Zm00001d023333_P025 Maize nucleus 52.59 59.86
Os12t0613200-02 Rice nucleus 55.68 59.41
CDX95185 Canola endoplasmic reticulum, nucleus 13.92 36.81
TraesCS7D01G318100.1 Wheat nucleus 11.99 36.47
GSMUA_AchrUn_... Banana nucleus 31.63 35.57
KRH12193 Soybean nucleus 28.54 30.1
KRH37214 Soybean nucleus 28.23 29.75
VIT_00s0429g00030.t01 Wine grape nucleus 21.73 25.34
CDY52297 Canola nucleus 24.52 24.61
Bra027983.1-P Field mustard nucleus 24.59 24.52
AT5G42400.2 Thale cress nucleus 25.44 23.7
Solyc01g006880.2.1 Tomato nucleus 28.93 23.43
TraesCS3D01G369900.1 Wheat plastid 6.5 18.63
TraesCS5D01G184500.1 Wheat nucleus 4.95 18.03
TraesCS7D01G443000.1 Wheat nucleus 4.56 17.46
TraesCS2D01G300800.1 Wheat nucleus 5.41 13.94
TraesCS6D01G202600.1 Wheat nucleus 7.04 11.93
TraesCS3D01G144300.2 Wheat plastid 8.2 10.66
TraesCS3D01G237600.2 Wheat nucleus 8.2 10.37
TraesCS7D01G127100.2 Wheat nucleus 6.81 9.92
TraesCS7D01G127400.1 Wheat nucleus 6.03 9.73
TraesCS5D01G170100.5 Wheat nucleus, plastid 8.12 9.29
TraesCS4D01G184600.3 Wheat nucleus, plastid 6.34 9.21
TraesCS5D01G366700.1 Wheat plastid 10.6 7.07
TraesCS2D01G007100.1 Wheat nucleus 8.04 5.68
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.5Gene3D:2.170.270.10Gene3D:3.30.1490.40GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016043GO:GO:0016740GO:GO:0019538GO:GO:0042800InterPro:GYFInterPro:GYF-like_dom_sf
InterPro:IPR001214InterPro:IPR003169InterPro:IPR003616InterPro:IPR035445PFAM:PF00856PFscan:PS50280
PFscan:PS50829PFscan:PS50868PANTHER:PTHR22884PANTHER:PTHR22884:SF464InterPro:Post-SET_domInterPro:SETD1-like
InterPro:SET_domSMART:SM00317SMART:SM00508SUPFAM:SSF55277SUPFAM:SSF82199EnsemblPlantsGene:TraesCS5D01G051200
EnsemblPlants:TraesCS5D01G051200.1SEG:seg::::
Description
No Description!
Coordinates
chr5D:+:49105369..49113250
Molecular Weight (calculated)
143115.0 Da
IEP (calculated)
7.694
GRAVY (calculated)
-0.532
Length
1293 amino acids
Sequence
(BLAST)
0001: MPHARSDLAL DDSPAESSSF RSPSSFPRTK RTKWSDREPL DCSTSACGGA RVKMLDRCSE RRQIASCSGD QPQSSGMFVA TQGNACPVNN GGGIYSQSGM
0101: SYSNGQNGTY GAYPQHQPFE GCMYVNEHGQ MCGPYAPKQL YEGLSSSFLP QDLAIYALVG GQMLNPVALS SLEQFLSQWN SAGAVTTPNE SKENKTVART
0201: DKMAFPDALS SDESCWMFED SDGSRHGPHS LAELSYWLHS SYLQDLSMVY HVDSKFGPFT LVSLIDWWSG GHTEHSEASE NDSGSASDVL GDIVDDISHQ
0301: LHAGIVKSAR KIFVDEIFSC VLPEIIACRK TEKQLAAKSK LLAVKPDSKK ASALKGKAHA KFTNHKKGSS YNTVRATSPV AVQSTAVHTK FADVLSAVWQ
0401: TLYYESMKNI WDGILYDPVM DYCGAWIKRN HHSSLPCTSI PGSSDNRNKQ EADGLKVICD SEALECDMDF PPGFGPTLEC ASPVSPPLLD IGSCDDKNSW
0501: WRESNSTTYF DTSSGVQVML ANELYVAAKE TLFHHFREVI AEEITNWLGF GLEDITDQEL IRTPVHAPDS PSSAGMDIHE TPPIPPEMAQ DKLLDIAKMT
0601: TDAITSPAEM ALDAITSPAE MALDAITSTA EMALDAITSP AEMAVDEVLV TAEIATVPSP ADMVAGATSF VSDVATDKML TSHVEHQSPS SSYASIFEKL
0701: DVSEAAELDE SFDEVPPGME TGSASVLVMD KNKYQPSKSI NSMPGISRYI TVAICRQTLH TNVIEEWASL LSDTISECLD SWYTKQTVVP KNIDESLRPN
0801: KEYAYYRKRK LRNSCEAVSS KKAVRTPTDE QLSKPLRELV ERKVHLKNVQ EPRKVGKSKK SSKSRTKTLD NVVNTLNIEQ GLKRLSNDVP KTSKSRTKTL
0901: DNAVNPLNIE QGLKRLPNDV PKASKSRTKT LDNAVNPLNI KQGMKRLSNG VPKASKSHTK TLDNAVNPLN IEQGLERLSS DVPKTSKSRT KTLDNVVNPL
1001: NIEQDLKRLS NDVPKRQRTS HLTRMPLVDN EVPFENVSVP TKLAKKRKNK NMSTDSSQKA KPLILCPESD GCARASSNGW EWRNWARTAT PSERTRVRGY
1101: RVRSILSTSA NNVWKNPQVK GTSARTNRVK LRNLLAASEG TELLKITQSK ARKKRLRFQR SKIHEWGLVA LESIDAEDFV IEYVGELIRR PVSDIREAQY
1201: EKSGIGSSYL FRLDDDYVVD ATKRGGLARF INHSCEPNCY TKIITVEGHK KIFIYSKRRI YAGEELTYNY KFPLEEKKIP CHCGSQRCRG SMN
Best Arabidopsis Sequence Match ( AT5G42400.6 )
(BLAST)
0001: MVAVDSTFPS HGSSYSSRRK KVSALEPNYF GSMCMGVYSD DVSISAREVA QDYSCDSCGD LATVSSACCN FDELCGLDSA LEMGCRSNED CRAGQEASGS
0101: GIASGLDKSV PGYTMYASGW MYGNQQGQMC GPYTQQQLYD GLSTNFLPED LLVYPIINGY TANSVPLKYF KQFPDHVATG FAYLQNGIIS VAPSVTSFPP
0201: SSSNATVHQD EIQTEHATSA THLISHQTMP PQTSSNGSVL DQLTLNHEES NMLASFLSLG NEHACWFLVD GEGRNHGPHS ILELFSWQQH GYVSDAALIR
0301: DGENKLRPIT LASLIGVWRV KCGDANCDEP VTGVNFISEV SEELSVHLQS GIMKIARRAL LDEIISSVIS DFLKAKKSDE HLKSYPPTSA VESISSRVIN
0401: AEKSVVSNTE SAGCKNTMNE GGHSSIAAES SKYTKSVGSI ENFQTSCSAV CRTLHHHCMQ IMWNAVFYDT VATHSSCWRK NKIWFRSSDI STVNYCKGSH
0501: TKYSDKPESF ESFTCRVDSS SSKTAYSDEF DLATNGARVR GLSSDTYGTE SVIASISEHV ENELFLSLKT HLTDYTSILI KDGANNTTSS ARDGKMHEEN
0601: PPSLQGSFRE QYNLEGSSKK KNGLNVVPAK LRFSNDFSDS QRLLQEGESS EQITSEDIIA NIFSTALETS DIPVNDELDA LAIHEPPPPG CESNINMPCL
0701: RYKYQPVRSK ESIPEIKAYV SMALCRQKLH NDVMRDWKSL FLKCYLNEFL ASLKGSHQVS RKETLALKKR KTVTRNKKLV QSNISNQTAE KLRKPCVGAS
0801: EKVLVKRSKK LSDSHSMKEV LKVDTPSIDL SVRKPSQQKM RNTDRRDHCI IKDATKLHKE KVGKDAFSKV ICDKSQDLEM EDEFDDALLI TRLRRISRNK
0901: TKELRECRNA AKSCEEISVT AEESEETVDC KDHEESLSNK PSQKVKKAHT SKLKRKNLSD ARDEGTKSCN GAVKSFTEIS GKEGDTESLG LAISDKVSHQ
1001: NLSKRRKKDA AKNGQDMSNP TGNPPRLAEG KKFVEKSACS ISQKGRKSSQ SSILKRKHQL DEKISNVPSR RRLSLSSTDS EDAVIKEDYD VRNEEKLPCH
1101: TSDKLQKVGP NKLIRRRKPL AKHTTERSPI KDLSVDDGRP KPIALKPLEK LSSKPSKKKL FLSIPKSDGC ARTSINGWHW HAWSLKASAE ERARVRGSSC
1201: VHMQHFGSKS SLTQNVLSAR TNRAKLRNLL AAADGADVLK MSQLKARKKH LRFQQSKIHD WGLVALEPIE AEDFVIEYVG ELIRSSISEI RERQYEKMGI
1301: GSSYLFRLDD GYVLDATKRG GIARFINHSC EPNCYTKIIS VEGKKKIFIY AKRHIDAGEE ISYNYKFPLE DDKIPCNCGA PKCRGSLN
Arabidopsis Description
ATXR7SET domain protein 25 [Source:TAIR;Acc:AT5G42400]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.