Subcellular Localization
min:
: max
Winner_takes_all: nucleus, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52297 | Canola | nucleus | 95.91 | 36.41 |
| CDX95184 | Canola | cytosol | 68.3 | 29.64 |
| AT5G42400.2 | Thale cress | nucleus | 75.26 | 26.51 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 10.43 | 19.84 |
| CDX98400 | Canola | nucleus | 11.66 | 17.76 |
| CDY41194 | Canola | nucleus | 12.47 | 17.58 |
| CDX67818 | Canola | nucleus | 11.45 | 17.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.7 | 17.3 |
| CDX95590 | Canola | nucleus | 12.88 | 17.26 |
| KRH37214 | Soybean | nucleus | 43.15 | 17.2 |
| KRH12193 | Soybean | nucleus | 42.94 | 17.13 |
| CDX71856 | Canola | nucleus | 12.27 | 16.67 |
| CDX83438 | Canola | cytosol | 12.27 | 16.26 |
| Zm00001d023333_P025 | Maize | nucleus | 37.42 | 16.11 |
| KXG22920 | Sorghum | nucleus | 37.42 | 16.11 |
| CDX79778 | Canola | cytosol | 11.86 | 15.89 |
| Os12t0613200-02 | Rice | nucleus | 38.24 | 15.43 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 11.86 | 15.38 |
| TraesCS5B01G046300.1 | Wheat | nucleus, plastid | 37.01 | 13.98 |
| TraesCS5D01G051200.1 | Wheat | nucleus, plastid | 36.81 | 13.92 |
| TraesCS5A01G042700.1 | Wheat | nucleus, plastid | 36.81 | 13.9 |
| CDY15252 | Canola | nucleus | 12.47 | 13.77 |
| CDX88310 | Canola | nucleus | 12.68 | 13.45 |
| CDX87571 | Canola | nucleus | 12.68 | 13.45 |
| Solyc01g006880.2.1 | Tomato | nucleus | 41.72 | 12.78 |
| CDY23260 | Canola | nucleus | 12.27 | 12.15 |
| CDY36467 | Canola | nucleus | 12.27 | 12.12 |
| CDX89960 | Canola | nucleus | 12.68 | 9.72 |
| VIT_00s0429g00030.t01 | Wine grape | nucleus | 20.25 | 8.93 |
| CDY37467 | Canola | nucleus | 12.07 | 8.89 |
| CDY32472 | Canola | nucleus | 11.66 | 8.86 |
| CDX92851 | Canola | mitochondrion | 16.56 | 8.84 |
| CDY29869 | Canola | mitochondrion | 16.97 | 8.67 |
| CDY25072 | Canola | nucleus | 16.36 | 8.19 |
| CDY35655 | Canola | nucleus | 16.16 | 8.11 |
| CDY14381 | Canola | nucleus | 15.95 | 8.01 |
| CDX67860 | Canola | nucleus | 15.75 | 7.99 |
| CDY19078 | Canola | nucleus | 16.77 | 7.96 |
| CDY15398 | Canola | nucleus | 16.77 | 7.93 |
| CDY06182 | Canola | nucleus | 16.16 | 7.44 |
| CDY10007 | Canola | nucleus | 16.56 | 7.28 |
| CDY22021 | Canola | nucleus | 11.86 | 6.81 |
| CDY07102 | Canola | nucleus | 11.66 | 6.66 |
| CDY38942 | Canola | nucleus, plastid | 11.86 | 6.39 |
| CDX89569 | Canola | nucleus, plastid | 11.66 | 6.26 |
| CDY17381 | Canola | nucleus | 9.41 | 5.47 |
| CDX88357 | Canola | nucleus | 11.86 | 3.5 |
| CDX87527 | Canola | nucleus | 11.86 | 3.5 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.5 | Gene3D:2.170.270.10 | EnsemblPlants:CDX95185 | ProteinID:CDX95185 | ProteinID:CDX95185.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042800 |
| EnsemblPlantsGene:GSBRNA2T00100767001 | InterPro:IPR001214 | PFAM:PF00856 | PFscan:PS50280 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF464 |
| InterPro:SETD1-like | InterPro:SET_dom | SMART:SM00317 | SUPFAM:SSF82199 | UniParc:UPI0004EE51E5 | SEG:seg |
Description
BnaC09g16850D
Coordinates
chrLK031887:+:398424..402200
Molecular Weight (calculated)
54363.8 Da
IEP (calculated)
10.129
GRAVY (calculated)
-0.665
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDSIFDIRV CVFSFPFHVI SLNLLGISKS KTKELREGTD AAKSCEEISL SAEESVETVG FRDHEENLSN KSSQKVQKAN VSKLKRKNTS EVEGAQSCSG
101: ANGGYTEISG KDTDTESLGF ETRDKASHER LSKRRKKDAA KGKNIVEKSA CSVSQKSLKP SESSTLKRKH SLDENVPKDS ESAVGNEGKL PGNTSNKMQK
201: GNYFLRIGSK KLKLKRKLLP KHTTELSSIE DLAVDNDSRP TSIALKPLVK LGPKASNKKV LVPMPKSDGC ARTSINGWHW RAWSLKASPK ERASVRGSSC
301: VHTQHFGSKI SSSQNVLSAR TNRAKMRNLL AAADGADLLK VSQLKARKKR LRFQQSKIHD WGLVALEPID AEDFVIEYVG ELIRSSISEI REHQYEKMGI
401: GSSYLFRLDD GYVIDATKRG GIARFINHSC EPNCYTKIIS VDGKKKIFIY AKRHIDAGEE ISYNYKFPLE DNKIPCNCKA QNRCRGSLN
101: ANGGYTEISG KDTDTESLGF ETRDKASHER LSKRRKKDAA KGKNIVEKSA CSVSQKSLKP SESSTLKRKH SLDENVPKDS ESAVGNEGKL PGNTSNKMQK
201: GNYFLRIGSK KLKLKRKLLP KHTTELSSIE DLAVDNDSRP TSIALKPLVK LGPKASNKKV LVPMPKSDGC ARTSINGWHW RAWSLKASPK ERASVRGSSC
301: VHTQHFGSKI SSSQNVLSAR TNRAKMRNLL AAADGADLLK VSQLKARKKR LRFQQSKIHD WGLVALEPID AEDFVIEYVG ELIRSSISEI REHQYEKMGI
401: GSSYLFRLDD GYVIDATKRG GIARFINHSC EPNCYTKIIS VDGKKKIFIY AKRHIDAGEE ISYNYKFPLE DNKIPCNCKA QNRCRGSLN
0001: MVAVDSTFPS HGSSYSSRRK KVSALEPNYF GSMCMGVYSD DVSISAREVA QDYSCDSCGD LATVSSACCN FDELCGLDSA LEMGCRSNED CRAGQEASGS
0101: GIASGLDKSV PGYTMYASGW MYGNQQGQMC GPYTQQQLYD GLSTNFLPED LLVYPIINGY TANSVPLKYF KQFPDHVATG FAYLQNGIIS VAPSVTSFPP
0201: SSSNATVHQD EIQTEHATSA THLISHQTMP PQTSSNGSVL DQLTLNHEES NMLASFLSLG NEHACWFLVD GEGRNHGPHS ILELFSWQQH GYVSDAALIR
0301: DGENKLRPIT LASLIGVWRV KCGDANCDEP VTGVNFISEV SEELSVHLQS GIMKIARRAL LDEIISSVIS DFLKAKKSDE HLKSYPPTSA VESISSRVIN
0401: AEKSVVSNTE SAGCKNTMNE GGHSSIAAES SKYTKSVGSI ENFQTSCSAV CRTLHHHCMQ IMWNAVFYDT VATHSSCWRK NKIWFRSSDI STVNYCKGSH
0501: TKYSDKPESF ESFTCRVDSS SSKTAYSDEF DLATNGARVR GLSSDTYGTE SVIASISEHV ENELFLSLKT HLTDYTSILI KDGANNTTSS ARDGKMHEEN
0601: PPSLQGSFRE QYNLEGSSKK KNGLNVVPAK LRFSNDFSDS QRLLQEGESS EQITSEDIIA NIFSTALETS DIPVNDELDA LAIHEPPPPG CESNINMPCL
0701: RYKYQPVRSK ESIPEIKAYV SMALCRQKLH NDVMRDWKSL FLKCYLNEFL ASLKGSHQVS RKETLALKKR KTVTRNKKLV QSNISNQTAE KLRKPCVGAS
0801: EKVLVKRSKK LSDSHSMKEV LKVDTPSIDL SVRKPSQQKM RNTDRRDHCI IKDATKLHKE KVGKDAFSKV ICDKSQDLEM EDEFDDALLI TRLRRISRNK
0901: TKELRECRNA AKSCEEISVT AEESEETVDC KDHEESLSNK PSQKVKKAHT SKLKRKNLSD ARDEGTKSCN GAVKSFTEIS GKEGDTESLG LAISDKVSHQ
1001: NLSKRRKKDA AKNGQDMSNP TGNPPRLAEG KKFVEKSACS ISQKGRKSSQ SSILKRKHQL DEKISNVPSR RRLSLSSTDS EDAVIKEDYD VRNEEKLPCH
1101: TSDKLQKVGP NKLIRRRKPL AKHTTERSPI KDLSVDDGRP KPIALKPLEK LSSKPSKKKL FLSIPKSDGC ARTSINGWHW HAWSLKASAE ERARVRGSSC
1201: VHMQHFGSKS SLTQNVLSAR TNRAKLRNLL AAADGADVLK MSQLKARKKH LRFQQSKIHD WGLVALEPIE AEDFVIEYVG ELIRSSISEI RERQYEKMGI
1301: GSSYLFRLDD GYVLDATKRG GIARFINHSC EPNCYTKIIS VEGKKKIFIY AKRHIDAGEE ISYNYKFPLE DDKIPCNCGA PKCRGSLN
0101: GIASGLDKSV PGYTMYASGW MYGNQQGQMC GPYTQQQLYD GLSTNFLPED LLVYPIINGY TANSVPLKYF KQFPDHVATG FAYLQNGIIS VAPSVTSFPP
0201: SSSNATVHQD EIQTEHATSA THLISHQTMP PQTSSNGSVL DQLTLNHEES NMLASFLSLG NEHACWFLVD GEGRNHGPHS ILELFSWQQH GYVSDAALIR
0301: DGENKLRPIT LASLIGVWRV KCGDANCDEP VTGVNFISEV SEELSVHLQS GIMKIARRAL LDEIISSVIS DFLKAKKSDE HLKSYPPTSA VESISSRVIN
0401: AEKSVVSNTE SAGCKNTMNE GGHSSIAAES SKYTKSVGSI ENFQTSCSAV CRTLHHHCMQ IMWNAVFYDT VATHSSCWRK NKIWFRSSDI STVNYCKGSH
0501: TKYSDKPESF ESFTCRVDSS SSKTAYSDEF DLATNGARVR GLSSDTYGTE SVIASISEHV ENELFLSLKT HLTDYTSILI KDGANNTTSS ARDGKMHEEN
0601: PPSLQGSFRE QYNLEGSSKK KNGLNVVPAK LRFSNDFSDS QRLLQEGESS EQITSEDIIA NIFSTALETS DIPVNDELDA LAIHEPPPPG CESNINMPCL
0701: RYKYQPVRSK ESIPEIKAYV SMALCRQKLH NDVMRDWKSL FLKCYLNEFL ASLKGSHQVS RKETLALKKR KTVTRNKKLV QSNISNQTAE KLRKPCVGAS
0801: EKVLVKRSKK LSDSHSMKEV LKVDTPSIDL SVRKPSQQKM RNTDRRDHCI IKDATKLHKE KVGKDAFSKV ICDKSQDLEM EDEFDDALLI TRLRRISRNK
0901: TKELRECRNA AKSCEEISVT AEESEETVDC KDHEESLSNK PSQKVKKAHT SKLKRKNLSD ARDEGTKSCN GAVKSFTEIS GKEGDTESLG LAISDKVSHQ
1001: NLSKRRKKDA AKNGQDMSNP TGNPPRLAEG KKFVEKSACS ISQKGRKSSQ SSILKRKHQL DEKISNVPSR RRLSLSSTDS EDAVIKEDYD VRNEEKLPCH
1101: TSDKLQKVGP NKLIRRRKPL AKHTTERSPI KDLSVDDGRP KPIALKPLEK LSSKPSKKKL FLSIPKSDGC ARTSINGWHW HAWSLKASAE ERARVRGSSC
1201: VHMQHFGSKS SLTQNVLSAR TNRAKLRNLL AAADGADVLK MSQLKARKKH LRFQQSKIHD WGLVALEPIE AEDFVIEYVG ELIRSSISEI RERQYEKMGI
1301: GSSYLFRLDD GYVLDATKRG GIARFINHSC EPNCYTKIIS VEGKKKIFIY AKRHIDAGEE ISYNYKFPLE DDKIPCNCGA PKCRGSLN
Arabidopsis Description
ATXR7SET domain protein 25 [Source:TAIR;Acc:AT5G42400]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.