Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41194 | Canola | nucleus | 90.83 | 94.24 |
| AT3G59960.1 | Thale cress | nucleus | 63.33 | 69.3 |
| CDX98400 | Canola | nucleus | 61.39 | 68.85 |
| CDX67818 | Canola | nucleus | 60.0 | 67.29 |
| CDX79778 | Canola | cytosol | 57.5 | 56.71 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.33 | 55.7 |
| PGSC0003DMT400010951 | Potato | cytosol | 35.56 | 55.65 |
| CDX95590 | Canola | nucleus | 55.28 | 54.52 |
| CDX83438 | Canola | cytosol | 54.72 | 53.39 |
| GSMUA_Achr2P12180_001 | Banana | nucleus | 52.22 | 50.4 |
| Os09t0307800-01 | Rice | cytosol | 44.17 | 46.76 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 43.61 | 46.45 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 43.33 | 45.88 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 43.06 | 45.86 |
| VIT_16s0039g00740.t01 | Wine grape | mitochondrion | 57.5 | 45.59 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 44.44 | 45.07 |
| KRH75137 | Soybean | cytosol | 15.83 | 44.88 |
| Zm00001d005563_P006 | Maize | nucleus | 41.94 | 44.54 |
| Solyc12g100290.1.1 | Tomato | nucleus | 53.61 | 44.47 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 44.17 | 43.92 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 43.89 | 43.65 |
| Zm00001d020038_P001 | Maize | nucleus | 42.22 | 42.7 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 52.5 | 41.91 |
| HORVU5Hr1G054880.2 | Barley | mitochondrion | 44.17 | 41.51 |
| OQU89246 | Sorghum | nucleus | 42.5 | 41.02 |
| HORVU7Hr1G103420.7 | Barley | nucleus | 43.33 | 37.77 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 18.33 | 25.68 |
| CDY36467 | Canola | nucleus | 30.83 | 22.42 |
| CDY23260 | Canola | nucleus | 30.28 | 22.06 |
| CDX88310 | Canola | nucleus | 26.11 | 20.39 |
| CDX87571 | Canola | nucleus | 25.83 | 20.17 |
| CDX95185 | Canola | endoplasmic reticulum, nucleus | 16.67 | 12.27 |
| CDY15252 | Canola | nucleus | 14.72 | 11.96 |
| CDX89960 | Canola | nucleus | 14.72 | 8.31 |
| CDY32472 | Canola | nucleus | 14.44 | 8.09 |
| CDY37467 | Canola | nucleus | 14.44 | 7.83 |
| CDY22021 | Canola | nucleus | 16.67 | 7.04 |
| CDY07102 | Canola | nucleus | 16.67 | 7.01 |
| CDY38942 | Canola | nucleus, plastid | 17.22 | 6.84 |
| CDX92851 | Canola | mitochondrion | 17.22 | 6.77 |
| CDX89569 | Canola | nucleus, plastid | 16.94 | 6.7 |
| CDY29869 | Canola | mitochondrion | 17.78 | 6.69 |
| CDX67860 | Canola | nucleus | 16.67 | 6.22 |
| CDX87527 | Canola | nucleus | 28.33 | 6.16 |
| CDX88357 | Canola | nucleus | 28.33 | 6.16 |
| CDY25072 | Canola | nucleus | 16.67 | 6.14 |
| CDY14381 | Canola | nucleus | 16.11 | 5.95 |
| CDY35655 | Canola | nucleus | 16.11 | 5.95 |
| CDY19078 | Canola | nucleus | 16.67 | 5.83 |
| CDY15398 | Canola | nucleus | 16.67 | 5.8 |
| CDY06182 | Canola | nucleus | 16.67 | 5.65 |
| CDY17381 | Canola | nucleus | 13.06 | 5.59 |
| CDY10007 | Canola | nucleus | 16.39 | 5.3 |
| CDY52297 | Canola | nucleus | 17.22 | 4.81 |
| CDX95184 | Canola | cytosol | 3.61 | 1.15 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | GO:A0A078C4C7 | InterPro:AWS_dom | EnsemblPlants:CDX71856 |
| ProteinID:CDX71856 | ProteinID:CDX71856.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00155585001 | InterPro:Hist-Lys_N-MeTrfase_SET2_plant | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR025787 |
| PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 | PFscan:PS51578 | PANTHER:PTHR45396 |
| InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 |
| UniParc:UPI0004EF0E77 | SEG:seg | : | : | : | : |
Description
BnaC08g30180D
Coordinates
chrLK031795:-:862909..864937
Molecular Weight (calculated)
40785.2 Da
IEP (calculated)
8.974
GRAVY (calculated)
-0.521
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAKKKGPD QNPTMKGFIK FSKKISESEE LNFIKRNIYL NKKFNKKVKD HGIFCSCSVS PSSSTLCGSD CSCGILLSSC SSSCQCRCQC TNKPFQQRHI
101: KKMKLVQTEK CGYGIVADED INAGEFIIEY VGEVIDEKTC EERLMKLKHK DVTNFYLCQI NGNMLIDATY KGNKSRFINH SCNPNAEMQK WIIDGETRIG
201: IFATRYINRG EHLTYDYQFV QFGADQDCYC GAACCRKKLG AKAYKAKSVP SDEAVNLTAC KAVTWKPPKV KKTRGRHSPE VRKKHNLDAS GQSRNTHGQR
301: KICCPNCIGV VIMLARSTNQ RCFGIIREFD ECSRKHLVMY EDGVTETIDL SREVWKLIDV
101: KKMKLVQTEK CGYGIVADED INAGEFIIEY VGEVIDEKTC EERLMKLKHK DVTNFYLCQI NGNMLIDATY KGNKSRFINH SCNPNAEMQK WIIDGETRIG
201: IFATRYINRG EHLTYDYQFV QFGADQDCYC GAACCRKKLG AKAYKAKSVP SDEAVNLTAC KAVTWKPPKV KKTRGRHSPE VRKKHNLDAS GQSRNTHGQR
301: KICCPNCIGV VIMLARSTNQ RCFGIIREFD ECSRKHLVMY EDGVTETIDL SREVWKLIDV
001: MSSSKKGSDR NQIRKSLRKL KKQIGELEKL ESPDRLNNVK PIFIKRNIYL KKKLKKKVKD HGIFCSCSLD PGSSTLCGSD CNCGILLSSC SSSCKCSSEC
101: TNKPFQQRHI KKMKLVQTEK CGYGIVADED INSGEFIIEY VGEVIDDKIC EERLWKLNHK VETNFYLCQI NWNMVIDATH KGNKSRYINH SCSPNTEMQK
201: WIIDGETRIG IFATRFINKG EQLTYDYQFV QFGADQDCYC GAVCCRKKLG AKPCKTKNTT LEEAVKPVAC KVTWKTPKGK TRGRRIAGQA WNNHSQRKIC
301: CRDCIGAVIW LARPMNQKCF GIITQYDEF
101: TNKPFQQRHI KKMKLVQTEK CGYGIVADED INSGEFIIEY VGEVIDDKIC EERLWKLNHK VETNFYLCQI NWNMVIDATH KGNKSRYINH SCSPNTEMQK
201: WIIDGETRIG IFATRFINKG EQLTYDYQFV QFGADQDCYC GAVCCRKKLG AKPCKTKNTT LEEAVKPVAC KVTWKTPKGK TRGRRIAGQA WNNHSQRKIC
301: CRDCIGAVIW LARPMNQKCF GIITQYDEF
Arabidopsis Description
ASHH4histone-lysine N-methyltransferase ASHH4 [Source:TAIR;Acc:AT3G59960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.