Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010951 | Potato | cytosol | 51.97 | 28.7 |
| Bra003396.1-P | Field mustard | cytosol | 41.73 | 20.46 |
| KRH38763 | Soybean | cytosol | 54.33 | 19.77 |
| KRH09264 | Soybean | nucleus | 51.97 | 18.91 |
| AT2G44150.1 | Thale cress | nucleus | 51.18 | 17.91 |
| Bra004809.1-P | Field mustard | nucleus | 51.97 | 17.84 |
| CDX79778 | Canola | cytosol | 51.18 | 17.81 |
| GSMUA_Achr2P12180_001 | Banana | nucleus | 51.97 | 17.69 |
| CDX95590 | Canola | nucleus | 50.39 | 17.53 |
| Bra000343.1-P | Field mustard | cytosol | 49.61 | 17.4 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.18 | 17.24 |
| CDX83438 | Canola | cytosol | 48.82 | 16.8 |
| CDY41194 | Canola | nucleus | 45.67 | 16.71 |
| Bra007496.1-P | Field mustard | nucleus | 44.88 | 16.57 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 44.09 | 16.57 |
| AT3G59960.1 | Thale cress | nucleus | 42.52 | 16.41 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 43.31 | 16.27 |
| CDX67818 | Canola | nucleus | 40.94 | 16.2 |
| CDX98400 | Canola | nucleus | 40.94 | 16.2 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 43.31 | 16.18 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 44.88 | 16.06 |
| Os09t0307800-01 | Rice | cytosol | 42.52 | 15.88 |
| CDX71856 | Canola | nucleus | 44.88 | 15.83 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 44.88 | 15.75 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 44.09 | 15.47 |
| Solyc12g100290.1.1 | Tomato | nucleus | 52.76 | 15.44 |
| Zm00001d005563_P006 | Maize | nucleus | 40.16 | 15.04 |
| HORVU5Hr1G054880.2 | Barley | mitochondrion | 44.09 | 14.62 |
| Zm00001d020038_P001 | Maize | nucleus | 40.16 | 14.33 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 48.82 | 13.75 |
| OQU89246 | Sorghum | nucleus | 40.16 | 13.67 |
| HORVU7Hr1G103420.7 | Barley | nucleus | 44.09 | 13.56 |
| KRH54981 | Soybean | plastid | 35.43 | 8.56 |
| KRH35109 | Soybean | nucleus | 26.77 | 7.08 |
| KRG91687 | Soybean | nucleus | 26.77 | 6.85 |
| KRG94193 | Soybean | cytosol, nucleus | 20.47 | 4.9 |
| KRG96530 | Soybean | cytosol, nucleus | 17.32 | 3.24 |
| KRH68267 | Soybean | nucleus | 18.11 | 3.09 |
| KRH28654 | Soybean | nucleus | 16.54 | 3.0 |
| KRH69214 | Soybean | nucleus | 18.11 | 2.65 |
| KRH31789 | Soybean | nucleus | 18.11 | 2.64 |
| KRH53486 | Soybean | nucleus | 22.05 | 2.62 |
| KRH28444 | Soybean | nucleus | 17.32 | 2.56 |
| KRH77020 | Soybean | nucleus | 17.32 | 2.56 |
| KRH64461 | Soybean | nucleus | 21.26 | 2.55 |
| KRH68208 | Soybean | nucleus | 19.68 | 2.54 |
| KRG96460 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.68 | 2.54 |
| KRH06474 | Soybean | nucleus | 19.68 | 2.53 |
| KRH47912 | Soybean | nucleus | 19.68 | 2.53 |
| KRH01524 | Soybean | nucleus | 21.26 | 2.48 |
| KRH45215 | Soybean | nucleus | 21.26 | 2.48 |
| KRH68336 | Soybean | nucleus | 15.75 | 2.46 |
| KRH53306 | Soybean | nucleus | 30.71 | 1.91 |
| KRH12193 | Soybean | nucleus | 18.11 | 1.88 |
| KRH37214 | Soybean | nucleus | 18.11 | 1.87 |
| KRH64610 | Soybean | nucleus | 29.13 | 1.78 |
| KRH15817 | Soybean | nucleus | 19.68 | 1.25 |
| KRH05241 | Soybean | nucleus | 19.68 | 1.23 |
| KRG94170 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02000132 | EnsemblPlants:KRH75137 | EnsemblPlantsGene:GLYMA_01G064800 | Gene3D:2.170.270.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001214 | InterPro:SET_dom |
| PANTHER:PTHR22884 | PFAM:PF00856 | PFscan:PS50280 | ProteinID:KRH75137 | ProteinID:KRH75137.1 | SUPFAM:SSF82199 |
| TMHMM:TMhelix | UniParc:UPI00029483E9 | UniProt:K7K280 | MapMan:12.3.3.4 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:9894560..9895154
Molecular Weight (calculated)
14828.9 Da
IEP (calculated)
8.610
GRAVY (calculated)
-0.060
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQRGERNFY LCEINRDMVI DATYKGNKSR YTNHSCCPNT EMQKWIIDGE TRIGIFATSD IQKDIYAFGK FWRCWSLRNY ASMTGWLFYV SNYIVGLLHL
101: VHIKIAIEVL LSASVSWVSD LPSLNFL
101: VHIKIAIEVL LSASVSWVSD LPSLNFL
001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV
Arabidopsis Description
ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.