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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG96530
KRH22237
KRH27099
KRH28171
KRH28654
KRH31789
KRH31935
KRH42369
KRH58491
KRH68267
KRH68336
KRH69214
KRH71526
KRH77315

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02580.1 KRG96530 AT1G02580.1 10962025
AT1G02580.1 KRH28654 AT1G02580.1 10962025
AT1G02580.1 KRH31789 AT1G02580.1 10962025
AT1G02580.1 KRH68267 AT1G02580.1 10962025
AT1G02580.1 KRH68336 AT1G02580.1 10962025
AT1G02580.1 KRH69214 AT1G02580.1 10962025
AT1G02580.1 KRG96530 AT1G02580.1 11148284
AT1G02580.1 KRH28654 AT1G02580.1 11148284
AT1G02580.1 KRH31789 AT1G02580.1 11148284
AT1G02580.1 KRH68267 AT1G02580.1 11148284
AT1G02580.1 KRH68336 AT1G02580.1 11148284
AT1G02580.1 KRH69214 AT1G02580.1 11148284
AT1G02580.1 KRH28171 AT2G35670.1 15456723
AT1G02580.1 KRH77315 AT2G35670.1 15456723
AT1G02580.1 KRH28171 AT2G35670.1 16924116
AT1G02580.1 KRH77315 AT2G35670.1 16924116
AT1G02580.1 KRH22237 AT3G20740.1 10962025
AT1G02580.1 KRH27099 AT3G20740.1 10962025
AT1G02580.1 KRH31935 AT3G20740.1 10962025
AT1G02580.1 KRH71526 AT3G20740.1 10962025
AT1G02580.1 KRH22237 AT3G20740.1 11114524
AT1G02580.1 KRH27099 AT3G20740.1 11114524
AT1G02580.1 KRH31935 AT3G20740.1 11114524
AT1G02580.1 KRH71526 AT3G20740.1 11114524
AT1G02580.1 KRH22237 AT3G20740.1 11148284
AT1G02580.1 KRH27099 AT3G20740.1 11148284
AT1G02580.1 KRH31935 AT3G20740.1 11148284
AT1G02580.1 KRH71526 AT3G20740.1 11148284
AT1G02580.1 KRH22237 AT3G20740.1 15456723
AT1G02580.1 KRH27099 AT3G20740.1 15456723
AT1G02580.1 KRH31935 AT3G20740.1 15456723
AT1G02580.1 KRH71526 AT3G20740.1 15456723
AT1G02580.1 KRH22237 AT3G20740.1 15469499
AT1G02580.1 KRH27099 AT3G20740.1 15469499
AT1G02580.1 KRH31935 AT3G20740.1 15469499
AT1G02580.1 KRH71526 AT3G20740.1 15469499
AT1G02580.1 KRH22237 AT3G20740.1 18812497
AT1G02580.1 KRH27099 AT3G20740.1 18812497
AT1G02580.1 KRH31935 AT3G20740.1 18812497
AT1G02580.1 KRH71526 AT3G20740.1 18812497
AT1G02580.1 KRH42369 AT5G58230.1 12970192
AT1G02580.1 KRH58491 AT5G58230.1 12970192
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31789 Soybean nucleus 92.86 92.64
KRG96530 Soybean cytosol, nucleus 43.09 55.16
KRH28654 Soybean nucleus 43.66 54.14
KRH68267 Soybean nucleus 46.2 53.9
KRH68336 Soybean nucleus 48.39 51.6
GSMUA_Achr1P24850_001 Banana nucleus 51.84 51.08
KXG40039 Sorghum nucleus 49.65 47.94
Os03t0307800-01 Rice nucleus 48.73 47.26
KRH77020 Soybean nucleus 46.43 46.81
TraesCS4B01G181400.3 Wheat nucleus, plastid 47.93 46.74
CDY15252 Canola nucleus 23.85 46.73
KRH28444 Soybean nucleus 46.31 46.69
TraesCS4D01G184600.3 Wheat nucleus, plastid 47.81 46.63
HORVU4Hr1G053740.8 Barley cytosol, mitochondrion, nucleus 47.81 45.5
TraesCS4A01G121300.4 Wheat mitochondrion 47.35 42.46
Zm00001d047636_P002 Maize nucleus 42.97 42.0
AT1G02580.1 Thale cress nucleus 32.49 40.93
Bra033334.1-P Field mustard nucleus 29.26 39.81
CDX89960 Canola nucleus 29.26 39.81
CDY32472 Canola nucleus 28.69 38.72
CDY37467 Canola nucleus 29.61 38.7
Bra032592.1-P Field mustard nucleus 28.23 38.34
Zm00001d028890_P002 Maize nucleus 44.93 35.1
KRH75137 Soybean cytosol 2.65 18.11
KRH38763 Soybean cytosol 6.57 16.33
KRH09264 Soybean nucleus 6.45 16.05
KRH54981 Soybean plastid 8.99 14.83
KRH35109 Soybean nucleus 7.6 13.75
KRG91687 Soybean nucleus 7.83 13.71
KRG94193 Soybean cytosol, nucleus 7.37 12.05
KRH53486 Soybean nucleus 13.13 10.68
KRH64461 Soybean nucleus 13.02 10.66
KRH47912 Soybean nucleus 11.18 9.81
KRG96460 Soybean cytosol, mitochondrion, nucleus, plastid 10.94 9.63
KRH06474 Soybean nucleus 10.94 9.63
KRH68208 Soybean nucleus 10.83 9.56
KRH45215 Soybean nucleus 11.64 9.28
KRH01524 Soybean nucleus 11.41 9.1
KRG94170 Soybean nucleus 4.26 7.77
KRH12193 Soybean nucleus 10.6 7.5
KRH37214 Soybean nucleus 10.6 7.5
KRH05241 Soybean nucleus 11.75 5.02
KRH15817 Soybean nucleus 11.52 4.98
KRH53306 Soybean nucleus 11.52 4.9
KRH64610 Soybean nucleus 11.75 4.89
Protein Annotations
KEGG:00310+2.1.1.43EntrezGene:100795451MapMan:12.3.3.1.1.4MapMan:12.3.3.3Gene3D:2.170.270.10EMBL:ACUP02000690
InterPro:CXC_domEnsemblPlantsGene:GLYMA_02G012100GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0009987GO:GO:0016043GO:GO:0016740GO:GO:0018024
GO:GO:0019538GO:GO:0031519GO:GO:0032259GO:GO:0034968InterPro:Hist-Lys_N-MeTrfase_EZInterPro:IPR001214
InterPro:IPR025778InterPro:IPR026489UniProt:K7K5W6EnsemblPlants:KRH69214ProteinID:KRH69214ProteinID:KRH69214.1
PFAM:PF00856PFscan:PS50280PFscan:PS51576PFscan:PS51633PANTHER:PTHR22884PANTHER:PTHR22884:SF237
InterPro:SANT/MybInterPro:SET_domSMART:SM00317SMART:SM00717SMART:SM01114SUPFAM:SSF82199
InterPro:Tesmin/TSO1-like_CXCUniParc:UPI0002337A78SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:1100825..1110153
Molecular Weight (calculated)
97118.5 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.696
Length
868 amino acids
Sequence
(BLAST)
001: MVSKPTDSAS KPRKQLGEPA NDGIGSLSLE LNQLKKQIQA ERIVCIKEKI RSNEKKLQCH MSGVLSETST RGSSQTEENR KNPILSSRID HPLCKFSGFS
101: PVWGDKDHNN QDVLSATSIK MPYIETLPPY TSWIFLDRNQ RMAEDQSVVG RRRIYYDQHG SEALICSDSE EELTEPEEEK HEFSEAEDRV IWMAFEEYGL
201: NKEVPNIVSE FVGGTSLEIQ ERYKTIKEKN IGRLDQPSQN SGEYESTIGI CLEKSLSAAL DSFDNLFCRR CLIFDCRLHG CSQPLIYHSE KQTVWSDPEG
301: DRKPCSDQCY LQLKVVKNVT EDSTSGSDQN KRTTITEEAD VILAPSIIEE PSNQSIIPFQ TEVDCHGSLN LNVPISVSVE KRKVLNQSDM SPRDSTLHPN
401: DCQNSYKKLK AISDAVVTVN SDSSKKISLG ACGESIHTIT SAILDKSVKD NSIKLIDSSS TCPSDEQDKS IGDGPKDPTN ETEFKMSNSM EGIVDGMLSL
501: SDWKPLEKEL YLKGVELFGR NSCLIARNLL PGLKTCMEIA SYMHSGGVSM PHGSIVAPSS IMEEKGKFDA DCTDQEMPSR SRLLRKRGKT RKFKYSWKSA
601: GHPSIWKRIA DGKNQSCKQY TPCGCQSMCG KECTCINGGT CCEKYCGCSK SCKNRFRGCH CAKSQCRSRQ CPCFAAGREC DPDVCRNCWV SCGDGSLGEP
701: PRRGEGQCGN MRLLLRQQQR ILLAKSDVAG WGAFLKNPVN KNDYLGEYTG ELISHREADK RGKIYDRANS SFLFDLNDQY VLDAYRKGDK LKFANHSSNP
801: NCYAKVMLVA GDHRVGIFAK EHIDASEELF YDYRYGPDQA PPWARKPEGS KRDESTAPQG RAKKHQSH
Best Arabidopsis Sequence Match ( AT4G02020.1 )
(BLAST)
001: MVTDDSNSSG RIKSHVDDDD DGEEEEDRLE GLENRLSELK RKIQGERVRS IKEKFEANRK KVDAHVSPFS SAASSRATAE DNGNSNMLSS RMRMPLCKLN
101: GFSHGVGDRD YVPTKDVISA SVKLPIAERI PPYTTWIFLD RNQRMAEDQS VVGRRQIYYE QHGGETLICS DSEEEPEPEE EKREFSEGED SIIWLIGQEY
201: GMGEEVQDAL CQLLSVDASD ILERYNELKL KDKQNTEEFS NSGFKLGISL EKGLGAALDS FDNLFCRRCL VFDCRLHGCS QPLISASEKQ PYWSDYEGDR
301: KPCSKHCYLQ LKAVREVPET CSNFASKAEE KASEEECSKA VSSDVPHAAA SGVSLQVEKT DIGIKNVDSS SGVEQEHGIR GKREVPILKD SNDLPNLSNK
401: KQKTAASDTK MSFVNSVPSL DQALDSTKGD QGGTTDNKVN RDSEADAKEV GEPIPDNSVH DGGSSICQPH HGSGNGAIII AEMSETSRPS TEWNPIEKDL
501: YLKGVEIFGR NSCLIARNLL SGLKTCLDVS NYMRENEVSV FRRSSTPNLL LDDGRTDPGN DNDEVPPRTR LFRRKGKTRK LKYSTKSAGH PSVWKRIAGG
601: KNQSCKQYTP CGCLSMCGKD CPCLTNETCC EKYCGCSKSC KNRFRGCHCA KSQCRSRQCP CFAAGRECDP DVCRNCWVSC GDGSLGEAPR RGEGQCGNMR
701: LLLRQQQRIL LGKSDVAGWG AFLKNSVSKN EYLGEYTGEL ISHHEADKRG KIYDRANSSF LFDLNDQYVL DAQRKGDKLK FANHSAKPNC YAKVMFVAGD
801: HRVGIFANER IEASEELFYD YRYGPDQAPV WARKPEGSKK DDSAITHRRA RKHQSH
Arabidopsis Description
EZA1Histone-lysine N-methyltransferase EZA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSM8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.