Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53486 | Soybean | nucleus | 83.8 | 41.71 |
KRH64461 | Soybean | nucleus | 82.86 | 41.51 |
KRH47912 | Soybean | nucleus | 63.09 | 33.87 |
KRH06474 | Soybean | nucleus | 62.34 | 33.54 |
KRH68208 | Soybean | nucleus | 57.82 | 31.23 |
KRG96460 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.63 | 31.03 |
KRH75137 | Soybean | cytosol | 4.9 | 20.47 |
KRH09264 | Soybean | nucleus | 10.36 | 15.76 |
KRH38763 | Soybean | cytosol | 10.36 | 15.76 |
KRH01524 | Soybean | nucleus | 27.87 | 13.6 |
KRH45215 | Soybean | nucleus | 27.87 | 13.6 |
KRH54981 | Soybean | plastid | 12.24 | 12.36 |
KRH35109 | Soybean | nucleus | 10.36 | 11.46 |
KRG91687 | Soybean | nucleus | 10.36 | 11.09 |
KRG96530 | Soybean | cytosol, nucleus | 11.86 | 9.29 |
KRH28654 | Soybean | nucleus | 11.11 | 8.43 |
KRH68267 | Soybean | nucleus | 11.68 | 8.33 |
KRH77020 | Soybean | nucleus | 13.37 | 8.25 |
KRH28444 | Soybean | nucleus | 13.18 | 8.13 |
KRH69214 | Soybean | nucleus | 12.05 | 7.37 |
KRH31789 | Soybean | nucleus | 12.05 | 7.36 |
KRH68336 | Soybean | nucleus | 10.73 | 7.0 |
KRH12193 | Soybean | nucleus | 14.88 | 6.44 |
KRH37214 | Soybean | nucleus | 14.12 | 6.11 |
KRH15817 | Soybean | nucleus | 19.59 | 5.18 |
KRH05241 | Soybean | nucleus | 19.77 | 5.17 |
KRH53306 | Soybean | nucleus | 12.62 | 3.28 |
KRH64610 | Soybean | nucleus | 12.62 | 3.21 |
KRG94170 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
MapMan:12.3.3.5 | Gene3D:2.170.270.10 | Gene3D:3.30.40.10 | UniProt:A0A0R0ETR1 | EMBL:ACUP02011803 | EMBL:ACUP02011804 |
InterPro:EPHD | EnsemblPlantsGene:GLYMA_19G0668001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046872 |
InterPro:IPR001214 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:IPR034732 | EnsemblPlants:KRG94193 | ProteinID:KRG94193 |
ProteinID:KRG94193.1 | PFAM:PF00856 | PFAM:PF13831 | PFAM:PF13832 | ScanProsite:PS01359 | PFscan:PS50016 |
PFscan:PS50280 | PFscan:PS51805 | PANTHER:PTHR13793 | PANTHER:PTHR13793:SF5 | InterPro:SET_dom | SMART:SM00249 |
SMART:SM00317 | SUPFAM:SSF57903 | SUPFAM:SSF82199 | UniParc:UPI0006ED983E | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD |
InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:+:18385495..18401257
Molecular Weight (calculated)
60915.4 Da
IEP (calculated)
8.625
GRAVY (calculated)
-0.398
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: VLCKCGFCET RKQSLREWER HTGSKFRNWR TSVLVKGSML SLEKWMLQVA EFHANAVVSV KPKKPSFKER KQKLLTFLQE KYEPVCAKWT TERCAVCRWV
101: EDWDYNKIII CNRCQIAVHQ ECYGARNVQD FTSWVCKACE TPDIKQECCL CPVKGGALKP TDVDTLWVHV TCAWFRPEVS FASDEKMEPA LGILSIPLNS
201: FVKICVICKE IHGSCTQCCK CSTYFHAMCA SRAGYRMELH CMEKNGKQTT RMVSYCAYHR APNPDTVSIM QTPLGVISTK SLLQTKRKAG SRLISSKRIK
301: VEDTSPAENT RHEPFSAARC RIYRRTNHTK KRAAGEAIAH HVRGHYHHPL DAIQSLNADR MVDKPPAFSS FRERLHHLQR TENERVCFGR SGIHGWGLFA
401: RQNIQEGEMV LEYRGEQVRR SIADLREARY RLEGKDCYLF KISEEVVVDA TDKGNIARLI NHSCMPNCYA RIMSVGDDES RIVLIAKTDV STGDELTYAP
501: ICVSHMCISA ISACQEYWQY TCWHTLQTYS L
101: EDWDYNKIII CNRCQIAVHQ ECYGARNVQD FTSWVCKACE TPDIKQECCL CPVKGGALKP TDVDTLWVHV TCAWFRPEVS FASDEKMEPA LGILSIPLNS
201: FVKICVICKE IHGSCTQCCK CSTYFHAMCA SRAGYRMELH CMEKNGKQTT RMVSYCAYHR APNPDTVSIM QTPLGVISTK SLLQTKRKAG SRLISSKRIK
301: VEDTSPAENT RHEPFSAARC RIYRRTNHTK KRAAGEAIAH HVRGHYHHPL DAIQSLNADR MVDKPPAFSS FRERLHHLQR TENERVCFGR SGIHGWGLFA
401: RQNIQEGEMV LEYRGEQVRR SIADLREARY RLEGKDCYLF KISEEVVVDA TDKGNIARLI NHSCMPNCYA RIMSVGDDES RIVLIAKTDV STGDELTYAP
501: ICVSHMCISA ISACQEYWQY TCWHTLQTYS L
0001: MACFSNETQI EIDVHDLVEA PIRYDSIESI YSIPSSALCC VNAVGSHSLM SKKVKAQKLP MIEQFEIEGS GVSASDDCCR SDDYKLRIQR PEIVRVYYRR
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
Arabidopsis Description
ATX1Histone-lysine N-methyltransferase ATX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.