CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91687	Soybean	nucleus	93.96	90.93
Bra015723.1-P	Field mustard	nucleus	61.04	63.56
CDX87571	Canola	nucleus	61.04	63.56
CDX88310	Canola	nucleus	60.83	63.34
CDX67669	Canola	cytosol, nucleus, plastid	32.92	61.48
VIT_18s0072g00200.t01	Wine grape	nucleus	65.83	61.36
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	47.92	61.33
VIT_18s0072g00220.t01	Wine grape	nucleus	47.08	61.08
AT1G76710.3	Thale cress	nucleus	63.12	58.38
GSMUA_Achr10P...	Banana	nucleus	63.54	55.56
Os04t0429100-01	Rice	nucleus	59.58	55.21
Solyc07g008460.2.1	Tomato	nucleus	51.88	55.09
TraesCS2A01G302100.1	Wheat	nucleus	56.67	54.18
TraesCS2D01G300800.1	Wheat	nucleus	56.46	53.98
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	56.04	53.37
Solyc07g008580.1.1	Tomato	nucleus	30.62	52.88
PGSC0003DMT400028500	Potato	nucleus	43.96	52.62
Zm00001d003679_P006	Maize	nucleus	55.62	52.05
EES10812	Sorghum	nucleus	56.46	52.02
PGSC0003DMT400059166	Potato	nucleus	32.92	51.97
TraesCS2B01G317900.1	Wheat	nucleus	56.88	51.61
Solyc09g060000.1.1	Tomato	nucleus	27.08	49.43
PGSC0003DMT400028514	Potato	nucleus	22.92	49.11
PGSC0003DMT400059198	Potato	nucleus	36.25	48.6
PGSC0003DMT400086207	Potato	nucleus	24.17	46.59
Solyc07g008500.1.1	Tomato	nucleus	27.29	45.49
KRH38763	Soybean	cytosol	19.79	27.22
KRH09264	Soybean	nucleus	19.79	27.22
KRH75137	Soybean	cytosol	7.08	26.77
KRH54981	Soybean	plastid	18.54	16.92
KRG94193	Soybean	cytosol, nucleus	11.46	10.36
KRG96530	Soybean	cytosol, nucleus	12.71	9.0
KRH28654	Soybean	nucleus	12.71	8.71
KRH68267	Soybean	nucleus	12.5	8.06
KRH68336	Soybean	nucleus	13.12	7.74
KRH77020	Soybean	nucleus	13.75	7.67
KRH28444	Soybean	nucleus	13.75	7.67
KRH69214	Soybean	nucleus	13.75	7.6
KRH31789	Soybean	nucleus	13.75	7.59
KRH53306	Soybean	nucleus	27.29	6.42
KRH68208	Soybean	nucleus	12.92	6.31
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	12.92	6.29
KRH64610	Soybean	nucleus	26.88	6.19
KRH47912	Soybean	nucleus	12.5	6.07
KRH06474	Soybean	nucleus	12.08	5.88
KRH64461	Soybean	nucleus	12.92	5.85
KRH53486	Soybean	nucleus	12.92	5.81
KRH01524	Soybean	nucleus	12.92	5.7
KRH45215	Soybean	nucleus	12.92	5.7
KRH12193	Soybean	nucleus	13.33	5.22
KRH37214	Soybean	nucleus	13.33	5.22
KRH15817	Soybean	nucleus	11.88	2.84
KRH05241	Soybean	nucleus	11.88	2.81
KRG94170	Soybean	nucleus	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100804657	MapMan:12.3.3.4	Gene3D:2.170.270.10	EMBL:ACUP02006650	InterPro:AWS_dom
EnsemblPlantsGene:GLYMA_10G222800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	UniProt:I1LDE3	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
EnsemblPlants:KRH35109	ProteinID:KRH35109	ProteinID:KRH35109.1	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868
PFscan:PS51215	PANTHER:PTHR45396	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00570
SUPFAM:SSF82199	UniParc:UPI00001C0905	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:45381577..45387369

Molecular Weight (calculated)

54283.6 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.597

Length

480 amino acids

Sequence
(BLAST)

001: MDPHTEELPQ YIHINQNEFC IRRHKKQKEE DIAICECKYD ADDPDNACGD SCLNVLTSTE CTPGYCHCDI LCKNQKFQKC EYAKTKLFKT EGRGWGLLAD
101: EDIKAGQFVI EYCGEVISWK EAKRRSQAYE NQGLKDAFII FLNVSESIDA TRKGSLARFI NHSCQPNCET RKWNVLGEIR VGIFAKHDIP IGTELAYDYN
201: FEWFGGAKVR CLCGALKCSG FLGAKSRGFQ EDTYLWEDDD GRYSVEKIPV YDSAEDEPVS NFNGRTEPSL DVIVKAEQLS ESTAFHVQPL DSVQMKDLDV
301: KKIKTDVADE DMNFYSQDSE HTLSQKNAIS HIRSNTAGRN YCLGPRSMST KRSRAYNGGR FKNLIEKKID VKFAAALLAS KEAQEEIFNC EKMKDDATSA
401: LDSLYDEIRP AIEEHERDSQ DSVSTTVAEK WIQACCLKLK AEFDLYSSIV KNVACTAQRA SGQVKPTEVD NENEIKLLTG

Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)

001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK

Arabidopsis Description

ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.