CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35109	Soybean	nucleus	90.93	93.96
Bra015723.1-P	Field mustard	nucleus	59.88	64.43
CDX88310	Canola	nucleus	59.88	64.43
CDX87571	Canola	nucleus	59.68	64.21
CDX67669	Canola	cytosol, nucleus, plastid	32.66	63.03
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	46.98	62.13
VIT_18s0072g00220.t01	Wine grape	nucleus	45.97	61.62
VIT_18s0072g00200.t01	Wine grape	nucleus	63.71	61.36
AT1G76710.3	Thale cress	nucleus	61.9	59.15
GSMUA_Achr10P...	Banana	nucleus	61.29	55.37
Os04t0429100-01	Rice	nucleus	57.66	55.21
Solyc07g008460.2.1	Tomato	nucleus	50.0	54.87
TraesCS2A01G302100.1	Wheat	nucleus	54.64	53.98
TraesCS2D01G300800.1	Wheat	nucleus	54.44	53.78
Solyc07g008580.1.1	Tomato	nucleus	30.04	53.6
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	54.03	53.17
PGSC0003DMT400059166	Potato	nucleus	32.26	52.63
Zm00001d003679_P006	Maize	nucleus	54.23	52.44
EES10812	Sorghum	nucleus	55.04	52.4
PGSC0003DMT400028500	Potato	nucleus	42.34	52.37
TraesCS2B01G317900.1	Wheat	nucleus	54.84	51.42
Solyc09g060000.1.1	Tomato	nucleus	26.61	50.19
PGSC0003DMT400028514	Potato	nucleus	22.58	50.0
PGSC0003DMT400059198	Potato	nucleus	35.69	49.44
PGSC0003DMT400086207	Potato	nucleus	23.79	47.39
Solyc07g008500.1.1	Tomato	nucleus	26.41	45.49
KRH38763	Soybean	cytosol	19.15	27.22
KRH09264	Soybean	nucleus	19.15	27.22
KRH75137	Soybean	cytosol	6.85	26.77
KRH54981	Soybean	plastid	17.74	16.73
KRG94193	Soybean	cytosol, nucleus	11.09	10.36
KRG96530	Soybean	cytosol, nucleus	12.7	9.29
KRH28654	Soybean	nucleus	12.7	9.0
KRH68267	Soybean	nucleus	12.3	8.2
KRH68336	Soybean	nucleus	13.1	7.99
KRH77020	Soybean	nucleus	13.71	7.9
KRH28444	Soybean	nucleus	13.71	7.9
KRH69214	Soybean	nucleus	13.71	7.83
KRH31789	Soybean	nucleus	13.71	7.82
KRH53306	Soybean	nucleus	26.61	6.47
KRH68208	Soybean	nucleus	12.7	6.41
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	12.7	6.39
KRH64610	Soybean	nucleus	26.21	6.24
KRH47912	Soybean	nucleus	12.1	6.07
KRH06474	Soybean	nucleus	11.9	5.98
KRH64461	Soybean	nucleus	12.5	5.85
KRH53486	Soybean	nucleus	12.5	5.81
KRH45215	Soybean	nucleus	12.7	5.79
KRH01524	Soybean	nucleus	12.7	5.79
KRH12193	Soybean	nucleus	12.9	5.22
KRH37214	Soybean	nucleus	12.9	5.22
KRH15817	Soybean	nucleus	11.9	2.94
KRH05241	Soybean	nucleus	11.69	2.85
KRG94170	Soybean	nucleus	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	UniProt:A0A0R0EM36	EMBL:ACUP02012699	InterPro:AWS_dom
EnsemblPlantsGene:GLYMA_20G168900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560	EnsemblPlants:KRG91687
ProteinID:KRG91687	ProteinID:KRG91687.1	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215
PANTHER:PTHR45396	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00570	SUPFAM:SSF82199
UniParc:UPI0006ED91CC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40672471..40679231

Molecular Weight (calculated)

56328.4 Da

IEP (calculated)

5.083

GRAVY (calculated)

-0.567

Length

496 amino acids

Sequence
(BLAST)

001: MYIFYFYRLP IQPVAQMDLH TEELPQYIHM NQNEFCIRRH KKQKEEDIAI CECKYDADDP DNACGDSCLN VLTSTECTPG YCPCGVLCKN QKFQKCEYAK
101: TKLFKTEGRG WGLLADEDIK AGQFVIEYCG EVISWKEAKR RSQAYENQGL KDAFIICLNA SESIDATRKG SLARFINHSC QPNCETRKWN VLGEIRVGIF
201: AKHDIPIGNE LAYDYNFEWF GGAKVRCLCG ALKCSGFLGA KSRGFQEDTY LWEDDDDRYS VEKIPVYDSA EDEPVSNFNG QTEPSLDVMV KAEQLLESTA
301: FHVQPLDSVQ MKDLDVKKIK TDVADEHMNL YYQDGEQTLS RKNAISRIRS NTAGRNYLLG PRSMSTKRSR SYNGVRFKNL TEKKIDAKFA AALLAFKEAQ
401: EEILNCEKIK DDATSALDSL YDEIRPAIEE HERDSQDSVS TTVAEKWIQA CCLKLKAEFD LYSSIVKNVA CTAQRAPGQG KPTEVDNENE IKLLTG

Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)

001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK

Arabidopsis Description

ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.