Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015723.1-P | Field mustard | nucleus | 79.19 | 89.15 |
| CDX88310 | Canola | nucleus | 78.81 | 88.72 |
| CDX87571 | Canola | nucleus | 78.81 | 88.72 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 39.69 | 80.16 |
| KRH35109 | Soybean | nucleus | 58.38 | 63.12 |
| KRG91687 | Soybean | nucleus | 59.15 | 61.9 |
| VIT_18s0072g00210.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 43.74 | 60.53 |
| VIT_18s0072g00220.t01 | Wine grape | nucleus | 42.58 | 59.73 |
| VIT_18s0072g00200.t01 | Wine grape | nucleus | 58.38 | 58.84 |
| Solyc07g008460.2.1 | Tomato | nucleus | 48.17 | 55.31 |
| PGSC0003DMT400059166 | Potato | nucleus | 31.41 | 53.62 |
| Solyc07g008580.1.1 | Tomato | nucleus | 28.71 | 53.6 |
| TraesCS2A01G302100.1 | Wheat | nucleus | 51.45 | 53.19 |
| TraesCS2D01G300800.1 | Wheat | nucleus | 51.25 | 52.99 |
| PGSC0003DMT400028500 | Potato | nucleus | 40.66 | 52.62 |
| HORVU2Hr1G074910.11 | Barley | cytosol, nucleus | 51.06 | 52.58 |
| Os04t0429100-01 | Rice | nucleus | 52.41 | 52.51 |
| GSMUA_Achr10P... | Banana | nucleus | 55.49 | 52.46 |
| Zm00001d003679_P006 | Maize | nucleus | 51.83 | 52.44 |
| EES10812 | Sorghum | nucleus | 52.22 | 52.02 |
| Solyc09g060000.1.1 | Tomato | nucleus | 25.82 | 50.95 |
| PGSC0003DMT400028514 | Potato | nucleus | 21.97 | 50.89 |
| TraesCS2B01G317900.1 | Wheat | nucleus | 50.87 | 49.91 |
| PGSC0003DMT400059198 | Potato | nucleus | 33.72 | 48.88 |
| Solyc07g008500.1.1 | Tomato | nucleus | 26.59 | 47.92 |
| PGSC0003DMT400086207 | Potato | nucleus | 22.93 | 47.79 |
| AT3G59960.1 | Thale cress | nucleus | 17.73 | 27.96 |
| AT2G44150.1 | Thale cress | nucleus | 18.69 | 26.72 |
| AT4G30860.1 | Thale cress | nucleus | 17.34 | 18.11 |
| AT1G02580.1 | Thale cress | nucleus | 11.75 | 8.85 |
| AT4G02020.1 | Thale cress | nucleus | 12.72 | 7.71 |
| AT2G23380.1 | Thale cress | nucleus | 12.72 | 7.32 |
| AT1G77300.1 | Thale cress | nucleus | 24.86 | 7.15 |
| AT3G61740.1 | Thale cress | nucleus | 12.14 | 6.19 |
| AT4G27910.1 | Thale cress | nucleus | 11.75 | 5.94 |
| AT5G53430.1 | Thale cress | nucleus | 11.56 | 5.75 |
| AT2G31650.1 | Thale cress | nucleus | 11.56 | 5.65 |
| AT1G05830.3 | Thale cress | nucleus | 11.56 | 5.54 |
| AT5G42400.2 | Thale cress | nucleus | 12.33 | 4.61 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | EntrezGene:844005 | UniProt:A0A1P8AR04 | ProteinID:ANM59092.1 |
| Symbol:ASHH1 | ArrayExpress:AT1G76710 | EnsemblPlantsGene:AT1G76710 | RefSeq:AT1G76710 | TAIR:AT1G76710 | RefSeq:AT1G76710-TAIR-G |
| EnsemblPlants:AT1G76710.3 | InterPro:AWS_dom | Unigene:At.70058 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR003616 |
| InterPro:IPR006560 | RefSeq:NP_001321484.1 | PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 |
| PANTHER:PTHR45396 | InterPro:Post-SET_dom | Symbol:SDG26 | InterPro:SET_dom | SMART:SM00317 | SMART:SM00508 |
| SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI0008484E95 | SEG:seg | : | : |
Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
Coordinates
chr1:-:28789720..28792719
Molecular Weight (calculated)
58434.4 Da
IEP (calculated)
5.203
GRAVY (calculated)
-0.718
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EVKQFFKRIG TNSKPSQYQM CLVNCCLQEV KKEAAVRLSS LYDEIRPAIE EHERDSQDSV ATSVAEKWIQ ASCNKLKAEF DLYSSVIKNI ASTPIKPQDT
501: KTKVAEAGNE DHIKLLEAK
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EVKQFFKRIG TNSKPSQYQM CLVNCCLQEV KKEAAVRLSS LYDEIRPAIE EHERDSQDSV ATSVAEKWIQ ASCNKLKAEF DLYSSVIKNI ASTPIKPQDT
501: KTKVAEAGNE DHIKLLEAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.