Factsheet for AT4G27910.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	4.58	87.04
CDY29869	Canola	mitochondrion	76.73	82.34
Bra040838.1-P	Field mustard	mitochondrion, nucleus	73.52	81.01
CDX92851	Canola	mitochondrion	70.69	79.26
Os01t0655300-01	Rice	cytosol, nucleus	3.99	78.85
AT5G53430.1	Thale cress	nucleus	78.38	77.18
KRH64461	Soybean	nucleus	68.35	66.23
KRH53486	Soybean	nucleus	68.26	65.7
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	60.47	63.3
VIT_16s0098g00350.t01	Wine grape	nucleus	64.36	61.26
GSMUA_Achr2P06290_001	Banana	nucleus	52.48	56.8
Zm00001d044020_P001	Maize	cytosol	14.12	56.64
GSMUA_Achr10P...	Banana	nucleus	52.58	55.38
GSMUA_Achr8P28030_001	Banana	nucleus	51.8	53.25
OQU87254	Sorghum	nucleus	45.37	52.54
TraesCS3D01G237600.2	Wheat	nucleus	50.44	50.68
TraesCS3A01G237200.2	Wheat	nucleus	50.63	50.58
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	50.44	50.54
TraesCS3B01G265800.1	Wheat	nucleus	50.54	50.49
Zm00001d011490_P003	Maize	nucleus	50.63	50.1
AT3G61740.1	Thale cress	nucleus	47.42	47.84
AT1G05830.3	Thale cress	nucleus	22.59	21.42
AT2G31650.1	Thale cress	nucleus	21.71	21.0
AT3G59960.1	Thale cress	nucleus	6.43	20.06
AT4G30860.1	Thale cress	nucleus	8.57	17.71
AT2G44150.1	Thale cress	nucleus	5.94	16.8
AT2G23380.1	Thale cress	nucleus	10.91	12.42
AT4G02020.1	Thale cress	nucleus	10.03	12.03
AT1G02580.1	Thale cress	nucleus	7.98	11.9
AT1G76710.3	Thale cress	nucleus	5.94	11.75
AT5G42400.2	Thale cress	nucleus	11.0	8.14
AT1G77300.1	Thale cress	nucleus	10.32	5.87

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	EntrezGene:828904
UniProt:A0A178UVA2	ProteinID:AEE85408.1	ArrayExpress:AT4G27910	EnsemblPlantsGene:AT4G27910	RefSeq:AT4G27910	TAIR:AT4G27910
RefSeq:AT4G27910-TAIR-G	EnsemblPlants:AT4G27910.1	TAIR:AT4G27910.1	Symbol:ATX4	EMBL:AY049754	ProteinID:CAB36760.1
ProteinID:CAB79593.1	ncoils:Coil	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016569	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
GO:GO:0046872	GO:GO:0051571	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	RefSeq:NP_194520.3	ProteinID:OAO96782.1
PFAM:PF00628	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	InterPro:Post-SET_dom	UniProt:Q9SUE7
InterPro:SET_dom	SMART:SM00249	SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748
SUPFAM:SSF82199	TMHMM:TMhelix	UniParc:UPI000034F123	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]

Coordinates

chr4:+:13893915..13900630

Molecular Weight (calculated)

116745.0 Da

IEP (calculated)

8.655

GRAVY (calculated)

-0.537

Length

1027 amino acids

Sequence
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.