Factsheet for AT1G02580.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15252	Canola	nucleus	41.94	65.24
CDX89960	Canola	nucleus	55.15	59.56
Bra033334.1-P	Field mustard	nucleus	55.15	59.56
CDY37467	Canola	nucleus	56.6	58.73
CDY32472	Canola	nucleus	54.43	58.32
Bra032592.1-P	Field mustard	nucleus	53.7	57.9
AT4G02020.1	Thale cress	nucleus	45.43	36.57
KRG96530	Soybean	cytosol, nucleus	35.7	36.28
KRH28654	Soybean	nucleus	35.27	34.71
KRH68267	Soybean	nucleus	36.87	34.14
KRH69214	Soybean	nucleus	40.93	32.49
KRH68336	Soybean	nucleus	37.88	32.06
KRH31789	Soybean	nucleus	40.35	31.95
GSMUA_Achr1P24850_001	Banana	nucleus	38.75	30.31
KXG40039	Sorghum	nucleus	38.32	29.37
Os03t0307800-01	Rice	nucleus	38.03	29.27
TraesCS4B01G181400.3	Wheat	nucleus, plastid	37.59	29.1
TraesCS4D01G184600.3	Wheat	nucleus, plastid	37.59	29.1
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	37.74	28.51
Zm00001d047636_P002	Maize	nucleus	34.98	27.14
AT2G23380.1	Thale cress	nucleus	35.12	26.83
TraesCS4A01G121300.4	Wheat	mitochondrion	37.45	26.65
Zm00001d028890_P002	Maize	nucleus	35.12	21.78
AT3G59960.1	Thale cress	nucleus	8.27	17.33
AT4G30860.1	Thale cress	nucleus	10.89	15.09
AT2G44150.1	Thale cress	nucleus	7.69	14.6
AT1G76710.3	Thale cress	nucleus	8.85	11.75
AT3G61740.1	Thale cress	nucleus	12.05	8.15
AT4G27910.1	Thale cress	nucleus	11.9	7.98
AT5G53430.1	Thale cress	nucleus	12.05	7.96
AT2G31650.1	Thale cress	nucleus	12.05	7.82
AT1G05830.3	Thale cress	nucleus	11.9	7.57
AT5G42400.2	Thale cress	nucleus	11.76	5.84
AT1G77300.1	Thale cress	nucleus	12.19	4.65

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	EntrezGene:839422	ProteinID:AAD09103.1
ProteinID:AAG10636.1	ProteinID:AEE27447.1	EMBL:AF060485	ArrayExpress:AT1G02580	EnsemblPlantsGene:AT1G02580	RefSeq:AT1G02580
TAIR:AT1G02580	RefSeq:AT1G02580-TAIR-G	EnsemblPlants:AT1G02580.1	TAIR:AT1G02580.1	Unigene:At.10786	InterPro:CXC_dom
ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006349	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009628
GO:GO:0009646	GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0031519	GO:GO:0032259
GO:GO:0034968	GO:GO:0040029	GO:GO:0043565	GO:GO:0045892	GO:GO:0048317	GO:GO:2000014
InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214	InterPro:IPR025778	InterPro:IPR026489	Symbol:MEA	RefSeq:NP_563658.1
UniProt:O65312	PFAM:PF00856	PO:PO:0007621	PO:PO:0020003	PO:PO:0025074	PO:PO:0025281
PFscan:PS50280	PFscan:PS51576	PFscan:PS51633	PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SET_dom
SMART:SM00317	SMART:SM01114	SUPFAM:SSF82199	InterPro:Tesmin/TSO1-like_CXC	UniParc:UPI000003C2EE	SEG:seg

Description

MEAHistone-lysine N-methyltransferase MEDEA [Source:UniProtKB/Swiss-Prot;Acc:O65312]

Coordinates

chr1:+:544733..549202

Molecular Weight (calculated)

79313.8 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.837

Length

689 amino acids

Sequence
(BLAST)

001: MEKENHEDDG EGLPPELNQI KEQIEKERFL HIKRKFELRY IPSVATHASH HQSFDLNQPA AEDDNGGDNK SLLSRMQNPL RHFSASSDYN SYEDQGYVLD
101: EDQDYALEED VPLFLDEDVP LLPSVKLPIV EKLPRSITWV FTKSSQLMAE SDSVIGKRQI YYLNGEALEL SSEEDEEDEE EDEEEIKKEK CEFSEDVDRF
201: IWTVGQDYGL DDLVVRRALA KYLEVDVSDI LERYNELKLK NDGTAGEASD LTSKTITTAF QDFADRRHCR RCMIFDCHMH EKYEPESRSS EDKSSLFEDE
301: DRQPCSEHCY LKVRSVTEAD HVMDNDNSIS NKIVVSDPNN TMWTPVEKDL YLKGIEIFGR NSCDVALNIL RGLKTCLEIY NYMREQDQCT MSLDLNKTTQ
401: RHNQVTKKVS RKSSRSVRKK SRLRKYARYP PALKKTTSGE AKFYKHYTPC TCKSKCGQQC PCLTHENCCE KYCGCSKDCN NRFGGCNCAI GQCTNRQCPC
501: FAANRECDPD LCRSCPLSCG DGTLGETPVQ IQCKNMQFLL QTNKKILIGK SDVHGWGAFT WDSLKKNEYL GEYTGELITH DEANERGRIE DRIGSSYLFT
601: LNDQLEIDAR RKGNEFKFLN HSARPNCYAK LMIVRGDQRI GLFAERAIEE GEELFFDYCY GPEHADWSRG REPRKTGASK RSKEARPAR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.