Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Os03t0307800-01
Os03t0640100-01
Os04t0162100-01
Os08t0137100-01
Os08t0137250-01
Os09t0306800-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02580.1 Os03t0307800-01 AT1G02580.1 10962025
AT1G02580.1 Os03t0307800-01 AT1G02580.1 11148284
AT1G02580.1 Os04t0162100-01 AT2G35670.1 15456723
AT1G02580.1 Os09t0306800-01 AT2G35670.1 15456723
AT1G02580.1 Os04t0162100-01 AT2G35670.1 16924116
AT1G02580.1 Os09t0306800-01 AT2G35670.1 16924116
AT1G02580.1 Os08t0137100-01 AT3G20740.1 10962025
AT1G02580.1 Os08t0137250-01 AT3G20740.1 10962025
AT1G02580.1 Os08t0137100-01 AT3G20740.1 11114524
AT1G02580.1 Os08t0137250-01 AT3G20740.1 11114524
AT1G02580.1 Os08t0137100-01 AT3G20740.1 11148284
AT1G02580.1 Os08t0137250-01 AT3G20740.1 11148284
AT1G02580.1 Os08t0137100-01 AT3G20740.1 15456723
AT1G02580.1 Os08t0137250-01 AT3G20740.1 15456723
AT1G02580.1 Os08t0137100-01 AT3G20740.1 15469499
AT1G02580.1 Os08t0137250-01 AT3G20740.1 15469499
AT1G02580.1 Os08t0137100-01 AT3G20740.1 18812497
AT1G02580.1 Os08t0137250-01 AT3G20740.1 18812497
AT1G02580.1 Os03t0640100-01 AT5G58230.1 12970192
AT4G02020.1 Os04t0162100-01 AT2G35670.1 15456723
AT4G02020.1 Os09t0306800-01 AT2G35670.1 15456723
AT4G02020.1 Os04t0162100-01 AT2G35670.1 16924116
AT4G02020.1 Os09t0306800-01 AT2G35670.1 16924116
AT4G02020.1 Os08t0137100-01 AT3G20740.1 15456723
AT4G02020.1 Os08t0137250-01 AT3G20740.1 15456723
AT4G02020.1 Os04t0162100-01 AT4G16845.1 15456723
AT4G02020.1 Os09t0306800-01 AT4G16845.1 15456723
AT4G02020.1 Os04t0162100-01 AT5G51230.1 15456723
AT4G02020.1 Os09t0306800-01 AT5G51230.1 15456723
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG40039 Sorghum nucleus 76.42 76.08
TraesCS4B01G181400.3 Wheat nucleus, plastid 74.64 75.06
TraesCS4D01G184600.3 Wheat nucleus, plastid 74.53 74.94
HORVU4Hr1G053740.8 Barley cytosol, mitochondrion, nucleus 73.3 71.93
TraesCS4A01G121300.4 Wheat mitochondrion 73.18 67.67
Zm00001d047636_P002 Maize nucleus 66.26 66.78
GSMUA_Achr1P24850_001 Banana nucleus 57.65 58.57
Zm00001d028890_P002 Maize nucleus 70.5 56.8
VIT_07s0005g01490.t01 Wine grape nucleus 51.51 53.29
PGSC0003DMT400023342 Potato nucleus 47.71 51.51
Solyc01g079390.2.1 Tomato nucleus 47.6 51.39
CDY22021 Canola nucleus 47.04 49.41
AT4G02020.1 Thale cress nucleus 47.15 49.3
KRH31789 Soybean nucleus 47.6 48.97
CDY07102 Canola nucleus 46.82 48.95
KRH69214 Soybean nucleus 47.26 48.73
Bra036300.1-P Field mustard nucleus 40.78 46.79
KRH28654 Soybean nucleus 35.08 44.86
KRG96530 Soybean cytosol, nucleus 33.97 44.84
CDY17381 Canola nucleus 42.12 44.83
CDY15252 Canola nucleus 21.9 44.24
Os06t0275500-01 Rice nucleus 43.24 43.19
KRH68267 Soybean nucleus 35.2 42.34
KRH68336 Soybean nucleus 38.32 42.14
AT1G02580.1 Thale cress nucleus 29.27 38.03
Bra033334.1-P Field mustard nucleus 26.15 36.68
CDX89960 Canola nucleus 26.03 36.52
Bra032592.1-P Field mustard nucleus 26.03 36.46
CDY32472 Canola nucleus 26.15 36.39
CDY37467 Canola nucleus 26.59 35.84
Os01t0655300-01 Rice cytosol, nucleus 1.45 25.0
Os09t0307800-01 Rice cytosol 6.48 17.06
Os09t0556700-01 Rice nucleus 7.37 12.52
Os04t0429100-01 Rice nucleus 6.93 11.97
Os02t0554000-01 Rice nucleus 7.49 9.88
Os01t0218800-01 Rice nucleus 10.06 9.08
Os09t0134500-02 Rice nucleus 10.28 9.0
Os12t0613200-02 Rice nucleus 9.94 7.34
Os01t0218900-01 Rice nucleus 2.23 4.94
Os02t0553802-01 Rice nucleus 1.23 1.32
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.1.1.4MapMan:12.3.3.3Gene3D:2.170.270.10EntrezGene:4332612ProteinID:ABF95544.1
ProteinID:BAF11813.1ProteinID:BAS83828.1InterPro:CXC_domProteinID:EEE58920.1GO:GO:0000003GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005654GO:GO:0005677GO:GO:0006139GO:GO:0006325GO:GO:0006342
GO:GO:0006351GO:GO:0006355GO:GO:0006464GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0009058GO:GO:0009628GO:GO:0009791GO:GO:0009908GO:GO:0009987
GO:GO:0016043GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0030154GO:GO:0031519
GO:GO:0032259GO:GO:0034968GO:GO:0040029GO:GO:0048587GO:GO:0070734InterPro:Hist-Lys_N-MeTrfase_EZ
InterPro:IPR001214InterPro:IPR025778InterPro:IPR026489EnsemblPlantsGene:Os03g0307800EnsemblPlants:Os03t0307800-01PFAM:PF00856
PFscan:PS50280PFscan:PS51576PFscan:PS51633PANTHER:PTHR22884PANTHER:PTHR22884:SF237UniProt:Q10MI4
InterPro:SANT/MybInterPro:SET_domSMART:SM00317SMART:SM01114SUPFAM:SSF82199InterPro:Tesmin/TSO1-like_CXC
UniParc:UPI0000DB4993RefSeq:XP_015630972.1SEG:seg:::
Description
ENHANCER OF ZESTE 1Polycomb repressive complex2 (PRC2) key subunit, Enhancer of zeste [E(z)] genes, Short day promotion of flowering (Os03t0307800-01)
Coordinates
chr3:-:10952335..10959678
Molecular Weight (calculated)
99868.1 Da
IEP (calculated)
7.767
GRAVY (calculated)
-0.704
Length
895 amino acids
Sequence
(BLAST)
001: MASSSSKASD SSSQRPKRPD QGPSGKDAAG LVALHGKLAQ LKRQVQSTRL AAIKERVEAN RKALQVHTCA LFDVAAAAEV ASRGAEGGNA LSRGAAEGHR
101: RFVGWDSASG PGERELVHVQ EENLVAGTLV LSSSGGSGAS HRTVVQLVKL PVVDKIPPYT TWIFLDKNQR MADDQSVGRR RIYYDPIVNE ALICSESDDD
201: VPEPEEEKHV FTEGEDQLIW KATQDHGLSR EVLNVLCQFV DATPSEIEER SEVLFEKYEK QSQSSYKTDL QLFLDKTMDV ALDSFDNLFC RRCLVFDCRL
301: HGCSQNLVFP SEKQPYGHEL DENKRPCGDQ CYLRRREVYQ DTCNDDRNAC TTYNMDSRSS SLKVSATILS ESEDSNRDED NIKSTSIVET SRSKITNSEY
401: ADKSVTPPPG DASETENVSP DMPLRTLGRR KISKHASKSN DHSPDKRQKI YSSPFPFAMS VLNKQSVPEI GETCPDSIES AVDQLPSLDD PNKKISTKDM
501: CAGSTTNTTE NTLRDNNNNL FISNKEHSIS HWSALERDLY LKGIEIFGKN SCLIARNLLS GLKTCMEVAS YMYNNGAAMA KRPLSGKSIL GDFAEAEQGY
601: MEQDLVARTR ICRRKGRARK LKYTWKSAGH PTVRKRIGDG KQWYTQYNPC GCQQMCGKDC ACVENGTCCE KYCGCSKSCK NRFRGCHCAK SQCRSRQCPC
701: FAASRECDPD VCRNCWVSCG DGSLGEPLAR GDGYQCGNMK LLLKQQQRIL LGKSDVAGWG AFIKNPVNRN DYLGEYTGEL ISHREADKRG KIYDRANSSF
801: LFDLNEQYVL DAYRKGDKLK FANHSSNPNC YAKVMLVAGD HRVGIYAKDR IEASEELFYD YRYGPDQAPA WARRPEGSKK DEASVSHHRA HKVAR
Best Arabidopsis Sequence Match ( AT4G02020.1 )
(BLAST)
001: MVTDDSNSSG RIKSHVDDDD DGEEEEDRLE GLENRLSELK RKIQGERVRS IKEKFEANRK KVDAHVSPFS SAASSRATAE DNGNSNMLSS RMRMPLCKLN
101: GFSHGVGDRD YVPTKDVISA SVKLPIAERI PPYTTWIFLD RNQRMAEDQS VVGRRQIYYE QHGGETLICS DSEEEPEPEE EKREFSEGED SIIWLIGQEY
201: GMGEEVQDAL CQLLSVDASD ILERYNELKL KDKQNTEEFS NSGFKLGISL EKGLGAALDS FDNLFCRRCL VFDCRLHGCS QPLISASEKQ PYWSDYEGDR
301: KPCSKHCYLQ LKAVREVPET CSNFASKAEE KASEEECSKA VSSDVPHAAA SGVSLQVEKT DIGIKNVDSS SGVEQEHGIR GKREVPILKD SNDLPNLSNK
401: KQKTAASDTK MSFVNSVPSL DQALDSTKGD QGGTTDNKVN RDSEADAKEV GEPIPDNSVH DGGSSICQPH HGSGNGAIII AEMSETSRPS TEWNPIEKDL
501: YLKGVEIFGR NSCLIARNLL SGLKTCLDVS NYMRENEVSV FRRSSTPNLL LDDGRTDPGN DNDEVPPRTR LFRRKGKTRK LKYSTKSAGH PSVWKRIAGG
601: KNQSCKQYTP CGCLSMCGKD CPCLTNETCC EKYCGCSKSC KNRFRGCHCA KSQCRSRQCP CFAAGRECDP DVCRNCWVSC GDGSLGEAPR RGEGQCGNMR
701: LLLRQQQRIL LGKSDVAGWG AFLKNSVSKN EYLGEYTGEL ISHHEADKRG KIYDRANSSF LFDLNDQYVL DAQRKGDKLK FANHSAKPNC YAKVMFVAGD
801: HRVGIFANER IEASEELFYD YRYGPDQAPV WARKPEGSKK DDSAITHRRA RKHQSH
Arabidopsis Description
EZA1Histone-lysine N-methyltransferase EZA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSM8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.