Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0640100-01 | |
| Os04t0162100-01 | |
| Os08t0137100-01 | |
| Os08t0137250-01 | |
| Os09t0306800-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G128300.1 | Wheat | nucleus | 77.57 | 78.35 |
| TraesCS7D01G127100.2 | Wheat | nucleus | 77.46 | 78.24 |
| TraesCS7B01G028200.2 | Wheat | nucleus | 77.23 | 78.02 |
| EER89265 | Sorghum | plastid | 79.13 | 75.99 |
| HORVU7Hr1G026840.1 | Barley | cytosol, mitochondrion, nucleus | 77.23 | 75.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.38 | 70.17 |
| Zm00001d036296_P004 | Maize | nucleus, plastid | 76.56 | 69.72 |
| VIT_07s0031g00320.t01 | Wine grape | nucleus | 61.05 | 62.66 |
| KRH77020 | Soybean | nucleus | 58.93 | 61.32 |
| KRH28444 | Soybean | nucleus | 58.48 | 60.86 |
| TraesCS7B01G028500.2 | Wheat | nucleus | 51.23 | 57.23 |
| HORVU7Hr1G026910.29 | Barley | cytosol, nucleus | 50.0 | 56.92 |
| TraesCS7D01G127400.1 | Wheat | nucleus | 50.89 | 56.86 |
| TraesCS7A01G128600.1 | Wheat | nucleus | 50.0 | 55.93 |
| AT2G23380.1 | Thale cress | nucleus | 54.69 | 54.32 |
| Solyc03g044380.2.1 | Tomato | nucleus | 55.58 | 54.07 |
| PGSC0003DMT400084490 | Potato | nucleus | 55.36 | 53.8 |
| Bra032169.1-P | Field mustard | nucleus, plastid | 54.02 | 53.36 |
| CDY38942 | Canola | nucleus, plastid | 54.02 | 53.36 |
| CDX89569 | Canola | nucleus, plastid | 53.91 | 53.08 |
| PGSC0003DMT400010235 | Potato | nucleus | 42.63 | 46.64 |
| Os03t0307800-01 | Rice | nucleus | 43.19 | 43.24 |
| Os01t0655300-01 | Rice | cytosol, nucleus | 1.79 | 30.77 |
| Os09t0307800-01 | Rice | cytosol | 6.47 | 17.06 |
| Os09t0556700-01 | Rice | nucleus | 7.7 | 13.09 |
| Os04t0429100-01 | Rice | nucleus | 6.92 | 11.97 |
| Os02t0554000-01 | Rice | nucleus | 7.81 | 10.32 |
| Os01t0218800-01 | Rice | nucleus | 11.16 | 10.09 |
| Os09t0134500-02 | Rice | nucleus | 10.71 | 9.39 |
| Os12t0613200-02 | Rice | nucleus | 11.38 | 8.42 |
| Os01t0218900-01 | Rice | nucleus | 3.12 | 6.91 |
| Os02t0553802-01 | Rice | nucleus | 1.45 | 1.56 |
Protein Annotations
Description
CURLY LEAFH3K27 methyltransferase, Polycomb repressive complex2 (PRC2) key subunit, Enhancer of zeste [E(z)] genes, Long day repression of flowering (Os06t0275500-01)
Coordinates
chr6:+:9353713..9362032
Molecular Weight (calculated)
100301.0 Da
IEP (calculated)
7.736
GRAVY (calculated)
-0.747
Length
896 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDSRNEPM FCEEGSSESG YVLCVIDSLK KKITSDRFVY IQKRVEENSI KLSPITLHSH NLSKNRQTST SNSTDLVSNL LTKRKEDALC AVNSRESSPD
101: ESEGANCQDE CSSTVIVGGN LSARNSVRPI RLPEVATLPP YTTWIFLDRN QRMQEDQSVL GRRRIYYDTN CGEALICSDS EDEAVEDEEE KKEFKDSEDC
201: IIRMTIQECG MSDAVLETLA RDIERAPDDI KARYEILQGE KPEGSSKKVS ELNVKMEDVY GDKDLDAALD SFDNLFCRRC LVFDCKLHGC SQDLVFPTEK
301: QAPLCSSDEG TPCGIHCYKL VSKPDAIMEI DSHLLVDVEE PTSDNLKDQI GSNKKKLGSS GQKTKSQQSE SSSTARVSSE SSESEVQLLS NKSPQHSPGL
401: SKNKLGAKGG IKKSTNRRIA ERILMSVKKG QQEMSPDSNS IVNGCHWPRD MKLRSDTRSG IKDSVVSSQC NSPSTRSFRK KGTLQMENNS SFVDAQSDSM
501: EDTNNEHSAT DGCDSSRKEE CVDESICRQE AHGRSWKVIE QGLLLKGLEI FGKNSCLIAR NLLGGMKTCT DVFQYMNYIE NSSASGALSG VDSLVKGYMK
601: GNELRTRSRF VRRRGRVRRL KYTWKTAGYH FIRKRITERK DQPCRQYTPC GCQSACGKQC PCLTNGTCCE KYCGCPKMCK NRFRGCHCAK SQCRSRQCPC
701: FAADRECDPD VCRNCWVGCG DGTLGVPNQR GDNYECRNMK LLLKQQQRVL LGRSDVSGWG AFLKNSVGKH EYLGEYTGEL ISHKEADKRG KIYDRENSSF
801: LFNLNNEYVL DAYRMGDKLK FANHSPDPNC YAKVIMVAGD HRVGIFAKER ISAGEELFYD YRYEPDRAPA WARKPEGPGA KDDAQPSTGR AKKLAH
101: ESEGANCQDE CSSTVIVGGN LSARNSVRPI RLPEVATLPP YTTWIFLDRN QRMQEDQSVL GRRRIYYDTN CGEALICSDS EDEAVEDEEE KKEFKDSEDC
201: IIRMTIQECG MSDAVLETLA RDIERAPDDI KARYEILQGE KPEGSSKKVS ELNVKMEDVY GDKDLDAALD SFDNLFCRRC LVFDCKLHGC SQDLVFPTEK
301: QAPLCSSDEG TPCGIHCYKL VSKPDAIMEI DSHLLVDVEE PTSDNLKDQI GSNKKKLGSS GQKTKSQQSE SSSTARVSSE SSESEVQLLS NKSPQHSPGL
401: SKNKLGAKGG IKKSTNRRIA ERILMSVKKG QQEMSPDSNS IVNGCHWPRD MKLRSDTRSG IKDSVVSSQC NSPSTRSFRK KGTLQMENNS SFVDAQSDSM
501: EDTNNEHSAT DGCDSSRKEE CVDESICRQE AHGRSWKVIE QGLLLKGLEI FGKNSCLIAR NLLGGMKTCT DVFQYMNYIE NSSASGALSG VDSLVKGYMK
601: GNELRTRSRF VRRRGRVRRL KYTWKTAGYH FIRKRITERK DQPCRQYTPC GCQSACGKQC PCLTNGTCCE KYCGCPKMCK NRFRGCHCAK SQCRSRQCPC
701: FAADRECDPD VCRNCWVGCG DGTLGVPNQR GDNYECRNMK LLLKQQQRVL LGRSDVSGWG AFLKNSVGKH EYLGEYTGEL ISHKEADKRG KIYDRENSSF
801: LFNLNNEYVL DAYRMGDKLK FANHSPDPNC YAKVIMVAGD HRVGIFAKER ISAGEELFYD YRYEPDRAPA WARKPEGPGA KDDAQPSTGR AKKLAH
001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA
Arabidopsis Description
CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.