Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0613200-02 | Rice | nucleus | 3.6 | 2.48 |
| Os09t0134500-02 | Rice | nucleus | 1.92 | 1.57 |
| Os06t0275500-01 | Rice | nucleus | 1.56 | 1.45 |
| Os03t0307800-01 | Rice | nucleus | 1.32 | 1.23 |
| Os01t0218900-01 | Rice | nucleus | 0.48 | 0.99 |
| Os01t0218800-01 | Rice | nucleus | 0.48 | 0.4 |
| Os09t0307800-01 | Rice | cytosol | 0.12 | 0.29 |
| Os01t0655300-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| Os02t0554000-01 | Rice | nucleus | 0.0 | 0.0 |
| Os04t0429100-01 | Rice | nucleus | 0.0 | 0.0 |
| Os09t0556700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0553802-01 | EnsemblPlantsGene:Os02g0553802 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008270 | GO:GO:0016740 | GO:GO:0032259 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | SEG:seg |
| UniParc:UPI0003938BF3 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical conserved gene. (Os02t0553802-01)
Coordinates
chr2:+:20896232..20899172
Molecular Weight (calculated)
89471.4 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.613
Length
834 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPDGEARG REDHAAVGRL GGEEGAVGGG GLALLAVPEI GGELGDGGKV CGGQERRLPT EEDGVRDNGG GSAAELVESA VNVSTPFEGR GQIGGEKESS
101: MQEGSMNMAG EKHGSYHVES AEPSNLQTCH APNGGVSNKT LFAPFSEVFS SDNSHMRYLL DKATEGSICE HGDLADSKDD LGGATDVKTN TEDLQMVCTK
201: PHCDSEGLSD LHNDSERWPQ VVDGVGFTIK GNNELKQVDL IPKIEAEVSR SVEDDSIPSF SGGIDDSLRK AGCACETLND MGMSHMANGD LWCNVLYAPL
301: SEGCQSKDAR HIAVMGNKVT QGSQCGQGDL ACDGIVLRGG VDVEKSLDDL QMCSKEPQCD NKGFPYLTEF GVQQPSYGMN VICSKTDPNH QLEKDELLTN
401: TRGEFSSSIH EDSVPSISVS SVDFTFDGNA GQIGKTSEHR AIMEKVSHGS QRGGVLSCES RSLKESHADE NQSSTLEVKT CEEGLQTGQV EPCHSIVALS
501: DSGKYGTDIL PRGGDGLRSM TGANHELVKD DFHPKSDVVV SCPVDEASIP SNYNSPIDVL LYKEDGLVGE ISENRIGVEK LAHDLLGEVM LSFDSRPQTE
601: ASGDENQHFW MDVPKGSTAS VCEVENTGTR RSCDPCAEIE FPLQQSREKH VISESPPERD LTSSSHNLPC ENEPCYSGRE TPAFCLGHQD SAGLGLESSD
701: CLVQELNTCT STDDKACSVD FVENGNGSHN QKEVPVIFFR RRNPVRAASS RNSNFEKCDQ INKSGNSTRK SKKVDSVSSL LKSTMIKFPN KTTKGRSGIN
801: RPLNSSAWGS LQKLMDGFNQ NCGPSTSRSH QTCL
101: MQEGSMNMAG EKHGSYHVES AEPSNLQTCH APNGGVSNKT LFAPFSEVFS SDNSHMRYLL DKATEGSICE HGDLADSKDD LGGATDVKTN TEDLQMVCTK
201: PHCDSEGLSD LHNDSERWPQ VVDGVGFTIK GNNELKQVDL IPKIEAEVSR SVEDDSIPSF SGGIDDSLRK AGCACETLND MGMSHMANGD LWCNVLYAPL
301: SEGCQSKDAR HIAVMGNKVT QGSQCGQGDL ACDGIVLRGG VDVEKSLDDL QMCSKEPQCD NKGFPYLTEF GVQQPSYGMN VICSKTDPNH QLEKDELLTN
401: TRGEFSSSIH EDSVPSISVS SVDFTFDGNA GQIGKTSEHR AIMEKVSHGS QRGGVLSCES RSLKESHADE NQSSTLEVKT CEEGLQTGQV EPCHSIVALS
501: DSGKYGTDIL PRGGDGLRSM TGANHELVKD DFHPKSDVVV SCPVDEASIP SNYNSPIDVL LYKEDGLVGE ISENRIGVEK LAHDLLGEVM LSFDSRPQTE
601: ASGDENQHFW MDVPKGSTAS VCEVENTGTR RSCDPCAEIE FPLQQSREKH VISESPPERD LTSSSHNLPC ENEPCYSGRE TPAFCLGHQD SAGLGLESSD
701: CLVQELNTCT STDDKACSVD FVENGNGSHN QKEVPVIFFR RRNPVRAASS RNSNFEKCDQ INKSGNSTRK SKKVDSVSSL LKSTMIKFPN KTTKGRSGIN
801: RPLNSSAWGS LQKLMDGFNQ NCGPSTSRSH QTCL
0001: MLTKFETKSN RVKGLSFHPK RPWILASLHS GVIQLWDYRM GTLIDRFDEH EGPVRGVHFH NSQPLFVSGG DDYKIKVWNY KTHRCLFTLL GHLDYIRTVQ
0101: FHHENPWIVS ASDDQTIRIW NWQSRTCISV LTGHNHYVMC ASFHPKEDLV VSASLDQTVR VWDIGALKKK SASPADDLMR FSQMNSDLFG GVDAIVKYVL
0201: EGHDRGVNWA SFHPTLPLIV SGADDRQVKL WRMNETKAWE VDTLRGHMNN VSSVMFHAKQ DIIVSNSEDK SIRVWDATKR TGIQTFRREH DRFWILAVHP
0301: EINLLAAGHD NGMIVFKLER ERPAFALSGD SLFYAKDRFL RYYEYSTQKD SQVIPIRRPG TPSLNQSPRT LSYSPTENAV LICSDLDGGS YELYIIPKDS
0401: VGRSDVVQDA KRGTGGSAVF IARNRFAVLE KSTSQVLVKN LKNEVVKKSS LPIPTDAIFY AGTGNLLCRS EDKVVIFDLQ QRLVLGELQT PFVRYVVWSN
0501: DMESVALLSK HTIIIASKKL VLQCTLHETI RVKSGAWDDN GVFIYTTLNH IKYCLPNGDS GIIRTLDVPI YITKVSGNTI FCLDRDGKNR AITINATEYI
0601: FKLALLRKKY DHVMSMIKNS QLCGQAMIAY LQQKGFPEVA LHFVEDERIR FNLALESGNI SVAVASATEI NEKDHWYRLG VEALRQGNSR IVEFAYQQTK
0701: NFERLSFLYL ITGNLDKLSK LMKIAEVKNN VMGQFHNALY LGDVKERVKI LENAGHLPLA YITASVHGLT DIAERLAIEL GDNVPSLPEG KTPSLLMPPS
0801: PIMCGGDWPL LRVMKGIFEG GLESANRGAV DEEEEDVEGD WGEGLDKFDV DGMENTDIEA ILDGAEAGEE EDDEEGGWGL DLDLPPELDT PKASANARSS
0901: TFVTPPQGMP VSQIWSQKSS LAAEQAAAGS FDTAMRLLHR QLGIKNFAPL KSMFLDLFSG SHSYLRAFSS SPVVPLAIER GWSESSSPNV RGPPALVFDF
1001: SQLEAKLKSG YKATTAGKLS EALRVFLSIL QTIPLVVVES RREVDEVKEL VIIVKEYVLG LQLELKRREM KDDPVRQQEL AAYFTHCKLQ TPHLRLAYFS
1101: AMTVCYKSKN MATAAHFARS LLDTNPTIES QARTARQVMQ AAERNMTDAT TLNYDFRNPF VICGSTYVPI YKGQKDVACP YCTARFVPSQ EGNICSVCDL
1201: AVIGADASGL LCSASQVR
0101: FHHENPWIVS ASDDQTIRIW NWQSRTCISV LTGHNHYVMC ASFHPKEDLV VSASLDQTVR VWDIGALKKK SASPADDLMR FSQMNSDLFG GVDAIVKYVL
0201: EGHDRGVNWA SFHPTLPLIV SGADDRQVKL WRMNETKAWE VDTLRGHMNN VSSVMFHAKQ DIIVSNSEDK SIRVWDATKR TGIQTFRREH DRFWILAVHP
0301: EINLLAAGHD NGMIVFKLER ERPAFALSGD SLFYAKDRFL RYYEYSTQKD SQVIPIRRPG TPSLNQSPRT LSYSPTENAV LICSDLDGGS YELYIIPKDS
0401: VGRSDVVQDA KRGTGGSAVF IARNRFAVLE KSTSQVLVKN LKNEVVKKSS LPIPTDAIFY AGTGNLLCRS EDKVVIFDLQ QRLVLGELQT PFVRYVVWSN
0501: DMESVALLSK HTIIIASKKL VLQCTLHETI RVKSGAWDDN GVFIYTTLNH IKYCLPNGDS GIIRTLDVPI YITKVSGNTI FCLDRDGKNR AITINATEYI
0601: FKLALLRKKY DHVMSMIKNS QLCGQAMIAY LQQKGFPEVA LHFVEDERIR FNLALESGNI SVAVASATEI NEKDHWYRLG VEALRQGNSR IVEFAYQQTK
0701: NFERLSFLYL ITGNLDKLSK LMKIAEVKNN VMGQFHNALY LGDVKERVKI LENAGHLPLA YITASVHGLT DIAERLAIEL GDNVPSLPEG KTPSLLMPPS
0801: PIMCGGDWPL LRVMKGIFEG GLESANRGAV DEEEEDVEGD WGEGLDKFDV DGMENTDIEA ILDGAEAGEE EDDEEGGWGL DLDLPPELDT PKASANARSS
0901: TFVTPPQGMP VSQIWSQKSS LAAEQAAAGS FDTAMRLLHR QLGIKNFAPL KSMFLDLFSG SHSYLRAFSS SPVVPLAIER GWSESSSPNV RGPPALVFDF
1001: SQLEAKLKSG YKATTAGKLS EALRVFLSIL QTIPLVVVES RREVDEVKEL VIIVKEYVLG LQLELKRREM KDDPVRQQEL AAYFTHCKLQ TPHLRLAYFS
1101: AMTVCYKSKN MATAAHFARS LLDTNPTIES QARTARQVMQ AAERNMTDAT TLNYDFRNPF VICGSTYVPI YKGQKDVACP YCTARFVPSQ EGNICSVCDL
1201: AVIGADASGL LCSASQVR
Arabidopsis Description
Coatomer subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.