Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G302100.1 | Wheat | nucleus | 77.61 | 80.08 |
TraesCS2D01G300800.1 | Wheat | nucleus | 77.41 | 79.88 |
HORVU2Hr1G074910.11 | Barley | cytosol, nucleus | 76.64 | 78.77 |
TraesCS2B01G317900.1 | Wheat | nucleus | 77.61 | 75.99 |
EES10812 | Sorghum | nucleus | 73.75 | 73.32 |
Zm00001d003679_P006 | Maize | nucleus | 72.01 | 72.71 |
CDX67669 | Canola | cytosol, nucleus, plastid | 30.12 | 60.7 |
KRH35109 | Soybean | nucleus | 55.21 | 59.58 |
GSMUA_Achr10P... | Banana | nucleus | 61.58 | 58.11 |
Bra015723.1-P | Field mustard | nucleus | 51.35 | 57.7 |
CDX87571 | Canola | nucleus | 51.35 | 57.7 |
KRG91687 | Soybean | nucleus | 55.21 | 57.66 |
VIT_18s0072g00210.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 41.7 | 57.6 |
CDX88310 | Canola | nucleus | 51.16 | 57.48 |
VIT_18s0072g00220.t01 | Wine grape | nucleus | 40.35 | 56.49 |
Solyc07g008460.2.1 | Tomato | nucleus | 47.1 | 53.98 |
VIT_18s0072g00200.t01 | Wine grape | nucleus | 52.7 | 53.01 |
AT1G76710.3 | Thale cress | nucleus | 52.51 | 52.41 |
PGSC0003DMT400028500 | Potato | nucleus | 39.58 | 51.12 |
Solyc07g008580.1.1 | Tomato | nucleus | 27.03 | 50.36 |
PGSC0003DMT400059166 | Potato | nucleus | 28.96 | 49.34 |
Solyc09g060000.1.1 | Tomato | nucleus | 24.9 | 49.05 |
PGSC0003DMT400059198 | Potato | nucleus | 33.4 | 48.32 |
PGSC0003DMT400028514 | Potato | nucleus | 20.66 | 47.77 |
Solyc07g008500.1.1 | Tomato | nucleus | 25.1 | 45.14 |
PGSC0003DMT400086207 | Potato | nucleus | 21.43 | 44.58 |
Os01t0655300-01 | Rice | cytosol, nucleus | 3.47 | 34.62 |
Os09t0307800-01 | Rice | cytosol | 18.53 | 28.24 |
Os02t0554000-01 | Rice | nucleus | 20.08 | 15.34 |
Os09t0556700-01 | Rice | nucleus | 12.16 | 11.95 |
Os03t0307800-01 | Rice | nucleus | 11.97 | 6.93 |
Os06t0275500-01 | Rice | nucleus | 11.97 | 6.92 |
Os01t0218800-01 | Rice | nucleus | 11.97 | 6.26 |
Os09t0134500-02 | Rice | nucleus | 11.39 | 5.77 |
Os12t0613200-02 | Rice | nucleus | 13.13 | 5.61 |
Os02t0553802-01 | Rice | nucleus | 0.0 | 0.0 |
Os01t0218900-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | EntrezGene:4335856 | InterPro:AWS_dom | UniProt:B9FF78 |
ProteinID:BAS89239.1 | ncoils:Coil | ProteinID:EEE61012.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016043 | GO:GO:0016579 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0018024 | GO:GO:0019538 |
GO:GO:0032259 | GO:GO:0034968 | GO:GO:0036459 | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 |
EnsemblPlantsGene:Os04g0429100 | EnsemblPlants:Os04t0429100-01 | PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 |
PANTHER:PTHR45396 | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00570 | SUPFAM:SSF82199 |
UniParc:UPI000021C696 | RefSeq:XP_015633505.1 | SEG:seg | : | : | : |
Description
SET protein 19, SET DOMAIN GROUP 708Histone H3 lysine 36-specific methyltransferase, Control of flowering time (Os04t0429100-01)
Coordinates
chr4:+:21258050..21262812
Molecular Weight (calculated)
57882.7 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.568
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEERMEPPP PPPYIHIETN DFLHRRHKRQ KEEDIAVCEC QYNLLDPDSA CGDRCLNVLT STECTPGYCL CGVYCKNQRF QKSQYAATRL VKTEGRGWGL
101: LADENIMAGQ FVMEYCGEVI SWKEAKRRSQ AYENQGLTDA YIIYLNADES IDATKKGSLA RFINHSCQPN CETRKWNVLG EVRVGIFAKQ DIPIGTELSY
201: DYNFEWFGGA MVRCLCGAGS CSGFLGAKSR GFQEATYLWE DDDDRFSVEN VPLYDSADDE PTSIPKDILI KDEPNTQDGN NNTIQNTGIP IIASSSEFTP
301: MNVEPSIASS NEFTPMNVEP LNVSSNELTP MTIEPLNAIP MGVDFTQNGS IEYGAQCAED ALQNSTRGVA NLQNQSAPRD NNHTELVAVK RRPTLRGGKA
401: KRGMRKQLNV VGICDRLASE VAREEILYCE EMKNEAAAEI DSLYDEIRPA IEEHERDSQD SVATSLAEKW IEASCCKYKA DFDLYASIIK NLASTPLRSK
501: EDAAPTEQNG LMYLENGP
101: LADENIMAGQ FVMEYCGEVI SWKEAKRRSQ AYENQGLTDA YIIYLNADES IDATKKGSLA RFINHSCQPN CETRKWNVLG EVRVGIFAKQ DIPIGTELSY
201: DYNFEWFGGA MVRCLCGAGS CSGFLGAKSR GFQEATYLWE DDDDRFSVEN VPLYDSADDE PTSIPKDILI KDEPNTQDGN NNTIQNTGIP IIASSSEFTP
301: MNVEPSIASS NEFTPMNVEP LNVSSNELTP MTIEPLNAIP MGVDFTQNGS IEYGAQCAED ALQNSTRGVA NLQNQSAPRD NNHTELVAVK RRPTLRGGKA
401: KRGMRKQLNV VGICDRLASE VAREEILYCE EMKNEAAAEI DSLYDEIRPA IEEHERDSQD SVATSLAEKW IEASCCKYKA DFDLYASIIK NLASTPLRSK
501: EDAAPTEQNG LMYLENGP
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
Arabidopsis Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.