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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G302100.1 Wheat nucleus 77.61 80.08
TraesCS2D01G300800.1 Wheat nucleus 77.41 79.88
HORVU2Hr1G074910.11 Barley cytosol, nucleus 76.64 78.77
TraesCS2B01G317900.1 Wheat nucleus 77.61 75.99
EES10812 Sorghum nucleus 73.75 73.32
Zm00001d003679_P006 Maize nucleus 72.01 72.71
CDX67669 Canola cytosol, nucleus, plastid 30.12 60.7
KRH35109 Soybean nucleus 55.21 59.58
GSMUA_Achr10P... Banana nucleus 61.58 58.11
Bra015723.1-P Field mustard nucleus 51.35 57.7
CDX87571 Canola nucleus 51.35 57.7
KRG91687 Soybean nucleus 55.21 57.66
VIT_18s0072g00210.t01 Wine grape endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 41.7 57.6
CDX88310 Canola nucleus 51.16 57.48
VIT_18s0072g00220.t01 Wine grape nucleus 40.35 56.49
Solyc07g008460.2.1 Tomato nucleus 47.1 53.98
VIT_18s0072g00200.t01 Wine grape nucleus 52.7 53.01
AT1G76710.3 Thale cress nucleus 52.51 52.41
PGSC0003DMT400028500 Potato nucleus 39.58 51.12
Solyc07g008580.1.1 Tomato nucleus 27.03 50.36
PGSC0003DMT400059166 Potato nucleus 28.96 49.34
Solyc09g060000.1.1 Tomato nucleus 24.9 49.05
PGSC0003DMT400059198 Potato nucleus 33.4 48.32
PGSC0003DMT400028514 Potato nucleus 20.66 47.77
Solyc07g008500.1.1 Tomato nucleus 25.1 45.14
PGSC0003DMT400086207 Potato nucleus 21.43 44.58
Os01t0655300-01 Rice cytosol, nucleus 3.47 34.62
Os09t0307800-01 Rice cytosol 18.53 28.24
Os02t0554000-01 Rice nucleus 20.08 15.34
Os09t0556700-01 Rice nucleus 12.16 11.95
Os03t0307800-01 Rice nucleus 11.97 6.93
Os06t0275500-01 Rice nucleus 11.97 6.92
Os01t0218800-01 Rice nucleus 11.97 6.26
Os09t0134500-02 Rice nucleus 11.39 5.77
Os12t0613200-02 Rice nucleus 13.13 5.61
Os02t0553802-01 Rice nucleus 0.0 0.0
Os01t0218900-01 Rice nucleus 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.4Gene3D:2.170.270.10EntrezGene:4335856InterPro:AWS_domUniProt:B9FF78
ProteinID:BAS89239.1ncoils:CoilProteinID:EEE61012.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464
GO:GO:0006511GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0009056GO:GO:0009987
GO:GO:0016043GO:GO:0016579GO:GO:0016740GO:GO:0016787GO:GO:0018024GO:GO:0019538
GO:GO:0032259GO:GO:0034968GO:GO:0036459InterPro:IPR001214InterPro:IPR003616InterPro:IPR006560
EnsemblPlantsGene:Os04g0429100EnsemblPlants:Os04t0429100-01PFAM:PF00856PFscan:PS50280PFscan:PS50868PFscan:PS51215
PANTHER:PTHR45396InterPro:Post-SET_domInterPro:SET_domSMART:SM00317SMART:SM00570SUPFAM:SSF82199
UniParc:UPI000021C696RefSeq:XP_015633505.1SEG:seg:::
Description
SET protein 19, SET DOMAIN GROUP 708Histone H3 lysine 36-specific methyltransferase, Control of flowering time (Os04t0429100-01)
Coordinates
chr4:+:21258050..21262812
Molecular Weight (calculated)
57882.7 Da
IEP (calculated)
4.412
GRAVY (calculated)
-0.568
Length
518 amino acids
Sequence
(BLAST)
001: MEEERMEPPP PPPYIHIETN DFLHRRHKRQ KEEDIAVCEC QYNLLDPDSA CGDRCLNVLT STECTPGYCL CGVYCKNQRF QKSQYAATRL VKTEGRGWGL
101: LADENIMAGQ FVMEYCGEVI SWKEAKRRSQ AYENQGLTDA YIIYLNADES IDATKKGSLA RFINHSCQPN CETRKWNVLG EVRVGIFAKQ DIPIGTELSY
201: DYNFEWFGGA MVRCLCGAGS CSGFLGAKSR GFQEATYLWE DDDDRFSVEN VPLYDSADDE PTSIPKDILI KDEPNTQDGN NNTIQNTGIP IIASSSEFTP
301: MNVEPSIASS NEFTPMNVEP LNVSSNELTP MTIEPLNAIP MGVDFTQNGS IEYGAQCAED ALQNSTRGVA NLQNQSAPRD NNHTELVAVK RRPTLRGGKA
401: KRGMRKQLNV VGICDRLASE VAREEILYCE EMKNEAAAEI DSLYDEIRPA IEEHERDSQD SVATSLAEKW IEASCCKYKA DFDLYASIIK NLASTPLRSK
501: EDAAPTEQNG LMYLENGP
Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
Arabidopsis Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.