Factsheet for Zm00001d003679_P006

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10812	Sorghum	nucleus	92.98	91.55
TraesCS2D01G300800.1	Wheat	nucleus	71.15	72.71
TraesCS2A01G302100.1	Wheat	nucleus	70.96	72.51
Os04t0429100-01	Rice	nucleus	72.71	72.01
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	69.79	71.03
TraesCS2B01G317900.1	Wheat	nucleus	71.15	69.0
CDX67669	Canola	cytosol, nucleus, plastid	30.02	59.92
CDX87571	Canola	nucleus	52.24	58.13
Bra015723.1-P	Field mustard	nucleus	52.05	57.92
CDX88310	Canola	nucleus	51.46	57.27
KRH35109	Soybean	nucleus	52.05	55.62
KRG91687	Soybean	nucleus	52.44	54.23
GSMUA_Achr10P...	Banana	nucleus	57.12	53.37
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	38.79	53.07
VIT_18s0072g00220.t01	Wine grape	nucleus	38.01	52.7
Solyc07g008460.2.1	Tomato	nucleus	45.81	51.99
AT1G76710.3	Thale cress	nucleus	52.44	51.83
Solyc07g008580.1.1	Tomato	nucleus	27.88	51.44
VIT_18s0072g00200.t01	Wine grape	nucleus	50.68	50.49
PGSC0003DMT400059166	Potato	nucleus	29.82	50.33
PGSC0003DMT400028500	Potato	nucleus	38.79	49.63
Solyc09g060000.1.1	Tomato	nucleus	25.15	49.05
PGSC0003DMT400028514	Potato	nucleus	20.86	47.77
PGSC0003DMT400059198	Potato	nucleus	32.55	46.65
Solyc07g008500.1.1	Tomato	nucleus	25.34	45.14
PGSC0003DMT400086207	Potato	nucleus	21.64	44.58
Zm00001d005563_P006	Maize	nucleus	16.96	25.66
Zm00001d020038_P001	Maize	nucleus	17.15	24.72
Zm00001d044020_P001	Maize	cytosol	9.94	19.92
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	15.2	15.63
Zm00001d051057_P002	Maize	nucleus	14.04	15.25
Zm00001d016804_P002	Maize	nucleus	23.59	6.74
Zm00001d008941_P002	Maize	plastid	12.67	6.6
Zm00001d036296_P004	Maize	nucleus, plastid	12.09	6.3
Zm00001d011490_P003	Maize	nucleus	12.67	6.26
Zm00001d023333_P025	Maize	nucleus	12.87	5.81
Zm00001d047636_P002	Maize	nucleus	9.55	5.52
Zm00001d019907_P003	Maize	nucleus	10.53	5.14
Zm00001d028890_P002	Maize	nucleus	11.11	5.13
Zm00001d039355_P010	Maize	plastid	8.97	3.22
Zm00001d006323_P069	Maize	nucleus	12.28	3.22

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	EntrezGene:542678	InterPro:AWS_dom	EMBL:AY122273
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560	ProteinID:ONM17500.1	PFAM:PF00856
PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PANTHER:PTHR45396	InterPro:Post-SET_dom	UniProt:Q8L819
InterPro:SET_dom	SMART:SM00317	SMART:SM00570	SUPFAM:SSF82199	UniParc:UPI00000A1192	EnsemblPlantsGene:Zm00001d003679
EnsemblPlants:Zm00001d003679_P006	EnsemblPlants:Zm00001d003679_T006	SEG:seg	:	:	:

Description

set domain gene102Histone-lysine N-methyltransferase ASHH1

Coordinates

chr2:-:53861070..53867710

Molecular Weight (calculated)

57255.7 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.565

Length

513 amino acids

Sequence
(BLAST)

001: MLMEEECVEA PSYIHIDSNA FSYRKHKSQT EEDIAVCECQ YDILDPESPC GDRCLNLLTN TECTPGYCRC GVYCKNQRFQ KCQYARTRLV RTGGRGWGLV
101: ADENIMAGQF VIEYCGEVIS WKEAKRRAQA YETQCLKDAY IIYLNADESI DATRKGNLAR FINHSCQPNC ETRKWNVLGE VRVGIFAKQN IPFGTELSYD
201: YNFEWYGGVM VRCLCGAASC SGFLGAKSRG FQEATYLWED DDDRFSVENI PLYDSADDEP TSINKEILVS SDGMVTQYSN ISRVQSTENP GNTGTNEFAP
301: IIVDELTSSN GLAPMNVEPL TVSSNEFTPS NAMPMVARLV ENGSTGYSAQ DTHDASQNSA PKAANHANQT GPQNNSNHSA LVPVKPAPKR RGRKPKRVVH
401: KQLDIPDICD RLTSSVACEE ILYCEEVKNQ AVSEIDALYD EIRPAVEEHE RDSQDSVSTS LAEKWIEASC RKYKAEFDLY AAVLKNVAST PLRSKDDVGP
501: REQNGLKYLE NGS

Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)

001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK

Arabidopsis Description

ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.