Factsheet for Zm00001d008941_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31547	Sorghum	cytosol, nucleus, plastid	88.12	89.48
Os01t0218800-01	Rice	nucleus	75.03	74.57
TraesCS3B01G161800.3	Wheat	plastid	75.13	74.37
HORVU3Hr1G027580.1	Barley	plastid	74.92	74.02
TraesCS3D01G144300.2	Wheat	plastid	74.62	73.94
TraesCS3A01G143300.2	Wheat	plastid	74.62	73.87
Zm00001d039355_P010	Maize	plastid	81.93	56.55
Zm00001d011490_P003	Maize	nucleus	44.97	42.68
Zm00001d044020_P001	Maize	cytosol	10.76	41.41
Zm00001d019907_P003	Maize	nucleus	20.71	19.41
Zm00001d005563_P006	Maize	nucleus	6.5	18.88
Zm00001d020038_P001	Maize	nucleus	6.7	18.54
Zm00001d051057_P002	Maize	nucleus	8.22	17.16
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	7.72	15.23
Zm00001d003679_P006	Maize	nucleus	6.6	12.67
Zm00001d036296_P004	Maize	nucleus, plastid	9.64	9.65
Zm00001d023333_P025	Maize	nucleus	10.05	8.71
Zm00001d047636_P002	Maize	nucleus	7.41	8.22
Zm00001d006323_P069	Maize	nucleus	14.01	7.04
Zm00001d028890_P002	Maize	nucleus	7.01	6.21
Zm00001d016804_P002	Maize	nucleus	9.85	5.4

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	UniProt:A0A1D6FGS6
ProteinID:AQK91050.1	ProteinID:AQK91052.1	ProteinID:AQK91054.1	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872
InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787
InterPro:IPR025780	InterPro:IPR034732	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF129	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom
SMART:SM00249	SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199
UniParc:UPI000843FB48	InterPro:Zinc_finger_PHD-type_CS	EnsemblPlantsGene:Zm00001d008941	EnsemblPlants:Zm00001d008941_P002	EnsemblPlants:Zm00001d008941_T002	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

arabidopsis trithorax homolog3Histone-lysine N-methyltransferase ATX3

Coordinates

chr8:-:26152233..26180018

Molecular Weight (calculated)

110107.0 Da

IEP (calculated)

7.965

GRAVY (calculated)

-0.467

Length

985 amino acids

Sequence
(BLAST)

001: MPASRIPFKR CTAAVPGVGK PGPAASMPPA KRRRDRVVPS RSRDSMPPPA PHVEEGDNRH GEVYNVELLM AEPKVDSFGP VETALWTQAR TAPTDADLYR
101: ACRNINKRGS CGGAASGSVL TSVSNAASDA CAGGNGTIVR VSNAALEGGA GSNGGLEGRP AVVECKPKRE GSDKKEDFYW PEDFVLGDVV WARSGKKSPM
201: WPALVIDPLQ HAPEVVLNSC VPGALCVMFF GYSANGHGRD YGWVKQGMIF PFVDYLDRFQ GQPLYKLRPT KFRAAIEEAF LAERGFFDLD MDGACSPRKF
301: VDKQSDPNGF QEEAASNNEQ ECQSESQVVG KSALCCDSCG NRLPSKVSKK RKQGGEQVLC RHCEKLLQSK QYCGICKKIW HHTDGGNWVC CDECQIWVHV
401: ECDLTCNNME DLENADYFCP DCKSKCKTVP ATEKMNTSHS SECASTSKGK STPMIAVFCN GEEALYVPEK HMILCQCKAC KERMMSLNEW EKHTGSRKKN
501: WKMSIRQKST GEPLINLLDD IPCGTSKSSK PGIKKGELLQ LQANAYSPVC AKWTTERCAV CRWVEDWDYN KIIICNRCQI AVHQECYGAR AVQDLTIWLC
601: RACEFSQQKR ECCLCPVKGG ALKPTDVDGL WVHVTCAWFQ PKVSFPVEET MEPAMGIMSI PAEYFKKTCV ICKQMHGACT QCYKCSTYYH AMCASRAGYR
701: MELQHYERSG RHITKMVSYC DFHSTPDPDN VLIVKTPEGV FSTKFFVQNG EKQTAARLAR KENYQEKVLP PIVSDCLVAK CLTYEMLKYK KEPGEAIAHR
801: IMGPRHHSQD FIDGLNAYMG HKDDQSFSTF KERLGYLQKT ENLRVSCGRS GIHGWGLFAA RNIQEGQMVI EYRGEQVRQR VADLREARYH REKKDCYLFK
901: ISEDVVIDAT GKGNIARLIN HSCMPSCYAR IVTVSGDRSQ IILIAKRDVS AGEELTYNYL FDPDESEDCK VPCLCKAPNC RGYMN

Best Arabidopsis Sequence Match ( AT5G53430.1 )
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Arabidopsis Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.