CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008941_P002	Maize	plastid	89.48	88.12
TraesCS3B01G161800.3	Wheat	plastid	74.95	73.07
TraesCS3D01G144300.2	Wheat	plastid	74.74	72.94
HORVU3Hr1G027580.1	Barley	plastid	74.85	72.82
TraesCS3A01G143300.2	Wheat	plastid	74.64	72.76
Os01t0218800-01	Rice	nucleus	74.12	72.55
Zm00001d039355_P010	Maize	plastid	82.78	56.27
OQU87254	Sorghum	nucleus	44.43	48.59
OQU80550	Sorghum	nucleus	7.22	21.6
EER96448	Sorghum	nucleus	19.79	18.82
OQU89246	Sorghum	nucleus	6.7	17.43
KXG30618	Sorghum	nucleus	8.87	14.65
EES10812	Sorghum	nucleus	6.8	12.67
EER89265	Sorghum	plastid	10.1	10.5
KXG40039	Sorghum	nucleus	8.76	9.45
KXG22920	Sorghum	nucleus	10.31	8.8
KXG36166	Sorghum	nucleus, plastid	13.92	7.09
OQU85110	Sorghum	nucleus	9.79	4.99

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	UniProt:A0A1B6Q0U0
InterPro:EPHD	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	EnsemblPlants:KXG31547
ProteinID:KXG31547	ProteinID:KXG31547.2	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566
PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF129	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom
SMART:SM00249	SMART:SM00317	SMART:SM00508	EnsemblPlantsGene:SORBI_3003G016500	SUPFAM:SSF57903	SUPFAM:SSF63748
SUPFAM:SSF82199	UniParc:UPI0009DC8C21	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1476411..1484547

Molecular Weight (calculated)

107876.0 Da

IEP (calculated)

7.596

GRAVY (calculated)

-0.451

Length

970 amino acids

Sequence
(BLAST)

001: MPPPAKKRAV VVSLPAPGGG LGVEKRDGEV YNVEVIMAEP KGDSFGPVET AVWTPARPAP TDADLYRACR NISKSGSFGG AASGSVLTSV SNAASDGGAG
101: GNGTTVRVSN AASDGGAGGK GTTVRVSNAA LEGGADGNGG LEGRPVVVEC KPKREASDKK EDFYWPEDFV LGDVVWARSG KKSPTWPALV IDPMQHAPEV
201: VLNSCVPGAL CVMFFGYSAN GHGRDYGWVK QGMIFPFVDY LDRFQGQPLY KLRPSKFRAA IEEAFLAERG FFDLEMDGVC SPRKSVNKQS DPNGFQEEAA
301: SNNEQECQSD NQVVGKLALS CDSCGNRLPS KVSKKRKQGG EQVLCRHCEK LLQSKQYCGI CKKIWHHTDG GNWVCCDECQ IWVHVECDLT CNNVEDLEKA
401: DYYCPDCKSK RKTVPATEKM NTSNSSECAS TTKEKLTAMI AVCCNGEEAL YVPEKHMILC QCKSCKERMM SLNEWEKHTG SRKKNWKMSI RQKSTGEPLI
501: NLLDDIPCGA SKSSNPGIKK EELLQLQANA YSPVCAKWTT ERCAVCRWVE DWDYNKIIIC NRCQIAVHQE CYGARAVQDL TTWLCRACEF PQQKRECCLC
601: PVKGGALKPT DIEGLWVHVT CAWFQPKVSF PVEETMEPAM GIMSIPVEYF KKTCVICKQI HGACTQCHKC STYYHAMCAS RAAYRMELQC SERSGRHTIK
701: MVSYCDFHST PDPDNVLIVK TPEGVFSTKF FLQNGEKQTA ARLVRKENHQ EKVLPSIVSD CLVAKCLTYE MSKYKKEPGE AIAHRIMGPR HHSQDFIDGL
801: NACMDRKDDQ SFSTFKERLG YLQKTENLRV SCGRSGIHGW GLFAARNIQE GQMVIEYRGE QVRRCVADLR EAQYHREKKD CYLFKISEDV VIDATDKGNI
901: ARLINHSCMP NCYARIMTVS GDRNQIILIA KRDVSAGEEL TYDYLFDPDE SEDCKVPCLC KAPNCRGYMN

Best Arabidopsis Sequence Match ( AT4G27910.1 )
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Arabidopsis Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.