Factsheet for Os01t0218800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G161800.3	Wheat	plastid	77.9	77.59
TraesCS3D01G144300.2	Wheat	plastid	77.8	77.57
TraesCS3A01G143300.2	Wheat	plastid	77.8	77.49
HORVU3Hr1G027580.1	Barley	plastid	77.9	77.43
Os01t0218900-01	Rice	nucleus	30.68	75.06
Zm00001d008941_P002	Maize	plastid	74.57	75.03
KXG31547	Sorghum	cytosol, nucleus, plastid	72.55	74.12
Os01t0655300-01	Rice	cytosol, nucleus	3.63	69.23
Zm00001d039355_P010	Maize	plastid	68.42	47.51
Os09t0134500-02	Rice	nucleus	20.89	20.25
Os09t0556700-01	Rice	nucleus	10.39	19.54
Os09t0307800-01	Rice	cytosol	6.05	17.65
Os04t0429100-01	Rice	nucleus	6.26	11.97
Os06t0275500-01	Rice	nucleus	10.09	11.16
Os03t0307800-01	Rice	nucleus	9.08	10.06
Os02t0554000-01	Rice	nucleus	6.86	10.03
Os12t0613200-02	Rice	nucleus	11.6	9.49
Os02t0553802-01	Rice	nucleus	0.4	0.48

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	EntrezGene:4324588
ProteinID:BAD81417.1	ProteinID:BAF04328.1	ProteinID:BAS71055.1	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872
InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787
InterPro:IPR025780	InterPro:IPR034732	EnsemblPlantsGene:Os01g0218800	EnsemblPlants:Os01t0218800-01	PFAM:PF00855	PFAM:PF00856
PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016	PFscan:PS50280	PFscan:PS50812
PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793	PANTHER:PTHR13793:SF129	InterPro:PWWP_dom
InterPro:Post-SET_dom	UniProt:Q5NAU4	InterPro:SET_dom	SMART:SM00249	SMART:SM00317	SUPFAM:SSF57903
SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI000049E77E	RefSeq:XP_015611850.1	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

SET protein 1Similar to Trithorax 5 (Fragment). (Os01t0218800-01);Similar to SET domain protein. (Os01t0218800-02)

Coordinates

chr1:-:6507368..6514640

Molecular Weight (calculated)

110898.0 Da

IEP (calculated)

7.843

GRAVY (calculated)

-0.455

Length

991 amino acids

Sequence
(BLAST)

001: MLASRIPLKR CTAAAVVPLP GELEMEEGPT PPAGGGEGSG AAVVPAKRRR ERVVPSRFRD SVVSLPLPPA KKGRPAKKAA AREGGDGEVY DVEVRAVEQQ
101: GATAAAFGAV ETAVWPGDER PAQTEEELYR ACRNIRRSSS SSGFSGSVVT SLSNAGGSVA PEGKPVVVVE CKPKREGGDK KEDFYWPEDF VLGDVVWARS
201: GKKCPAWPAV VIDPLLHAPA VVLNSCIPGA LCVMFFGFSS GGHGRDYGWI KQGMIFPFVD YLDRFQGQAL YKLKANRFRQ AIEEAFLAER GFCELEMDEG
301: CSLEKSVNDQ SVPDGLQEGS GSNNDQECQS EAQVVGKSTG CCDSCGNRVP PKIAKKKKQA GEQLLCRHCD KLLQSKQYCG ICKKIWHHTD GGNWVCCDEC
401: QIWVHVECDL TCINMEDLEN ADYFCPDCKS KRKTVPPVEQ MNTPNSSECA STSKEKLPEM IPVFCFGMDG MYLPKKHMIL CQCNSCKERL MSLSEWERHT
501: GSRKKNWKMS VKLKSNGDPL VTLLDDIPCA NVKSSTPSIN KEELLKLLAN SFRPVNARWT TERCAVCRWV EDWDYNKIII CNRCQIAVHQ ECYGARDVQD
601: FTNWVCRACE LPKQKRECCL CPVKGGALKP TDIDQLWVHV TCAWFQPKVS FPVDETMEPA MGILSIPSEY FKKACVICKQ MHGACTQCYK CSTYYHAMCA
701: SRAGYRMELQ YSEKNGRNIT RMVSYCAFHS TPDPDNVLIV KTPEGVFSTK FLPQNNEKQS GTRLVRKENL QEKVLPAKIS DCPAARCLPY EMLKNKKEPG
801: EAIAHRIMGP RHHSQESIEG LNACMDQKDE KSFATFRERL RYLQKIENKR VSCGRSGIHG WGLFAAKKIQ EGQMVIEYRG DQVRRSVADL REARYHREKK
901: DCYLFKISED VVVDATEKGN IARLINHSCM PNCYARIMSV GDEKSQIILI AKRDVSAGEE LTYDYLFDPD ESEDCRVPCL CKALNCRGYM N

Best Arabidopsis Sequence Match ( AT5G53430.1 )
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Arabidopsis Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.