CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083480.1	Barley	nucleus, peroxisome	50.62	69.2
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	79.94	51.9
Solyc07g006060.2.1	Tomato	nucleus	37.35	49.19
TraesCS3D01G369900.1	Wheat	plastid	66.67	47.89
PGSC0003DMT400028986	Potato	endoplasmic reticulum, extracellular	22.84	39.36
VIT_11s0037g00880.t01	Wine grape	nucleus	51.54	33.81
GSMUA_Achr7P16220_001	Banana	nucleus	51.23	33.2
KRH54981	Soybean	plastid	50.62	31.18
CDY36467	Canola	nucleus	47.22	30.91
AT4G30860.1	Thale cress	nucleus	47.22	30.78
Bra010270.1-P	Field mustard	nucleus	46.6	30.57
CDY23260	Canola	nucleus	46.6	30.57
GSMUA_Achr6P30890_001	Banana	mitochondrion	49.69	29.98
KXG30618	Sorghum	nucleus	49.69	27.43
OQU89246	Sorghum	nucleus	29.94	26.01
EES10812	Sorghum	nucleus	23.15	14.4
OQU87254	Sorghum	nucleus	22.22	8.12
KXG31547	Sorghum	cytosol, nucleus, plastid	21.6	7.22
KXG22920	Sorghum	nucleus	22.22	6.34
KXG40039	Sorghum	nucleus	16.67	6.01
EER89265	Sorghum	plastid	16.98	5.89
EER96448	Sorghum	nucleus	16.36	5.2
OQU85110	Sorghum	nucleus	25.62	4.36
KXG36166	Sorghum	nucleus, plastid	18.21	3.1

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	UniProt:A0A1Z5RAS4	InterPro:AWS_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560	InterPro:IPR025787	EnsemblPlants:OQU80550
ProteinID:OQU80550	ProteinID:OQU80550.1	ProteinID:OQU80551.1	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868
PFscan:PS51215	PFscan:PS51578	PANTHER:PTHR22884	PANTHER:PTHR22884:SF455	InterPro:Post-SET_dom	InterPro:SET_dom
SMART:SM00317	EnsemblPlantsGene:SORBI_3007G142801	SUPFAM:SSF82199	UniParc:UPI000B8BA5E9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:57279232..57287600

Molecular Weight (calculated)

36910.1 Da

IEP (calculated)

6.962

GRAVY (calculated)

-0.495

Length

324 amino acids

Sequence
(BLAST)

001: MQCSVNHCDV TLHKACSEET DGCCPRHICF CCKRRTSRHR IQRTMPVCTE CLLKNRMVDS EDLSRKMICW SIWPSTSEDA GPTDDIKEAF QRLPLPYIDQ
101: EFSIDPINKQ DLETESEPPP YVHIKDNVYI VKKKSDGDAI EGGCISCDHD STCESSCSCR SSMSSCSLDC PCSVKCSNKP FRREKKIEII KTQQCGWGAI
201: ALETIGKDDF VIEFVGEVID DAMCEDRLLD MRQRRDQNFY MCKVSKDFVI DATFKGNACR FFNHSCQPNC RLEKWQVDGK TRLGVFASQA IKVGMPLTYN
301: YRFSTAFGPQ KDCFCGAPNC QRKL

Best Arabidopsis Sequence Match ( AT4G30860.1 )
(BLAST)

001: MLDLGNMSMS ASVALTCCPS FLPAASGPEL AKSINSPENL AGECNGKHLP MIPPEEEVKD IKIANGVTAF TRKQNPSDRV KKGFVLDDHV KDWVKRRVAS
101: GVSESTCFLP FLVGAKKMVD CLVCHKPVYP GEDLSCSVRG CQGAYHSLCA KESLGFSKSS KFKCPQHECF VCKQRTQWRC VKCPMAAHDK HSPWSKEILH
201: LKDQPGRAVC WRHPTDWRLD TKHAVAQSEI EEVFCQLPLP YVEEEFKIDL AWKDSVVKED PPSYVHIRRN IYLVKKKRDN ANDGVGCTNC GPNCDRSCVC
301: RVQCISCSKG CSCPESCGNR PFRKEKKIKI VKTEHCGWGV EAAESINKED FIVEYIGEVI SDAQCEQRLW DMKHKGMKDF YMCEIQKDFT IDATFKGNAS
401: RFLNHSCNPN CVLEKWQVEG ETRVGVFAAR QIEAGEPLTY DYRFVQFGPE VKCNCGSENC QGYLGTKRKE PNCLVVSWGA KRRRLFHRPI ARKPQQD

Arabidopsis Description

ASHR3SDG4 [Source:UniProtKB/TrEMBL;Acc:A0A178UX33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.