Factsheet for Bra010270.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017974.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30860.1	Bra017974.1-P	AT3G49580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23260	Canola	nucleus	97.77	97.77
CDY36467	Canola	nucleus	97.37	97.17
AT4G30860.1	Thale cress	nucleus	84.62	84.1
Solyc07g006060.2.1	Tomato	nucleus	33.0	66.26
VIT_11s0037g00880.t01	Wine grape	nucleus	59.31	59.31
PGSC0003DMT400028986	Potato	endoplasmic reticulum, extracellular	21.86	57.45
KRH54981	Soybean	plastid	54.86	51.52
GSMUA_Achr7P16220_001	Banana	nucleus	51.82	51.2
HORVU3Hr1G083480.1	Barley	nucleus, peroxisome	24.29	50.63
OQU80550	Sorghum	nucleus	30.57	46.6
GSMUA_Achr6P30890_001	Banana	mitochondrion	50.4	46.37
Zm00001d051057_P002	Maize	nucleus	43.93	45.97
KXG30618	Sorghum	nucleus	48.18	40.55
TraesCS3D01G369900.1	Wheat	plastid	32.59	35.7
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	34.41	34.07
TraesCS6B01G249100.1	Wheat	nucleus	50.2	33.24
Bra003396.1-P	Field mustard	cytosol	17.21	32.82
TraesCS6D01G202600.1	Wheat	nucleus	50.4	32.63
TraesCS6A01G219600.1	Wheat	nucleus	50.4	32.46
Bra004809.1-P	Field mustard	nucleus	23.89	31.89
Bra007496.1-P	Field mustard	nucleus	22.06	31.69
Bra000343.1-P	Field mustard	cytosol	22.67	30.94
Bra015723.1-P	Field mustard	nucleus	17.0	18.22
Bra033334.1-P	Field mustard	nucleus	14.37	11.13
Bra032592.1-P	Field mustard	nucleus	13.77	10.64
Bra003056.1-P	Field mustard	nucleus	13.97	9.54
Bra036300.1-P	Field mustard	nucleus	14.37	9.1
Bra032169.1-P	Field mustard	nucleus, plastid	15.59	8.49
Bra040838.1-P	Field mustard	mitochondrion, nucleus	15.79	8.37
Bra003467.1-P	Field mustard	nucleus	16.8	8.02
Bra021721.1-P	Field mustard	nucleus	13.56	6.96
Bra015678.1-P	Field mustard	nucleus	22.06	6.58
Bra027983.1-P	Field mustard	nucleus	16.6	6.32

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	Gene3D:3.30.40.10	InterPro:AWS_dom	EnsemblPlantsGene:Bra010270
EnsemblPlants:Bra010270.1	EnsemblPlants:Bra010270.1-P	GO:GO:0000785	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR006560	InterPro:IPR013083	InterPro:IPR025787	UniProt:M4D1C1	PFAM:PF00856
ScanProsite:PS01359	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578	PANTHER:PTHR22884
PANTHER:PTHR22884:SF455	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00508	SUPFAM:SSF82199
UniParc:UPI0002546EF8	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT4G30860 (E=5e-243) ASHR3, SDG4 | SDG4 (SET DOMAIN GROUP 4); histone methyltransferase

Coordinates

chrA08:-:13549981..13552537

Molecular Weight (calculated)

55936.3 Da

IEP (calculated)

8.027

GRAVY (calculated)

-0.498

Length

494 amino acids

Sequence
(BLAST)

001: MLDLDNMSMS ASVSLTCCPA FLPAATGPEL AKPIDSPGNI AEDCNPEHKP MIPPAEEVRD INNAITVSNG RQDPSEKSKK GLVLEDHVKN WVKRRVESGV
101: SESRCVLPFL VGAKRMGDCL VCRKLVYPGE EVMCSVRGCQ GVYHLFCAKE SLGFHNLGKF RCPQHECFVC KQRTQWRCVK CPMAAHDKHA PWPKEILHMK
201: DQPGRAVCWR HSTDWRLDTK SGDAQSEIEE VFCQLPLPYV EEEFKIDLTW KDSVAKDDLP PYVHIRHIYL VKKKRDNAND GVGCTNCGPT CCRSCVCRVQ
301: CVSCSKRCGC PETCGNRPFR KDKKIKIVKT KLCGWGVEAA ESINKEDFIV EYIGEVISDA QCEQRLWDMK HKGLKDFYMC EIQKDFTIDA TFKGNASRFL
401: NHSCNPNCVL EKWQVEGETR VGVFAARQIE AGEPLTYDYR FVQFGPEVKC NCGSENCQGY LGTKRKEPNC LVVSWGAKRR RVSHRPLAHK LQQD

Best Arabidopsis Sequence Match ( AT4G30860.1 )
(BLAST)

001: MLDLGNMSMS ASVALTCCPS FLPAASGPEL AKSINSPENL AGECNGKHLP MIPPEEEVKD IKIANGVTAF TRKQNPSDRV KKGFVLDDHV KDWVKRRVAS
101: GVSESTCFLP FLVGAKKMVD CLVCHKPVYP GEDLSCSVRG CQGAYHSLCA KESLGFSKSS KFKCPQHECF VCKQRTQWRC VKCPMAAHDK HSPWSKEILH
201: LKDQPGRAVC WRHPTDWRLD TKHAVAQSEI EEVFCQLPLP YVEEEFKIDL AWKDSVVKED PPSYVHIRRN IYLVKKKRDN ANDGVGCTNC GPNCDRSCVC
301: RVQCISCSKG CSCPESCGNR PFRKEKKIKI VKTEHCGWGV EAAESINKED FIVEYIGEVI SDAQCEQRLW DMKHKGMKDF YMCEIQKDFT IDATFKGNAS
401: RFLNHSCNPN CVLEKWQVEG ETRVGVFAAR QIEAGEPLTY DYRFVQFGPE VKCNCGSENC QGYLGTKRKE PNCLVVSWGA KRRRLFHRPI ARKPQQD

Arabidopsis Description

ASHR3SDG4 [Source:UniProtKB/TrEMBL;Acc:A0A178UX33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.