Factsheet for Bra003396.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67818	Canola	nucleus	91.51	73.83
CDX98400	Canola	nucleus	89.58	72.27
Bra007496.1-P	Field mustard	nucleus	64.86	48.84
AT3G59960.1	Thale cress	nucleus	60.23	47.42
PGSC0003DMT400010951	Potato	cytosol	37.45	42.17
KRH75137	Soybean	cytosol	20.46	41.73
Bra004809.1-P	Field mustard	nucleus	54.44	38.11
Bra000343.1-P	Field mustard	cytosol	50.58	36.19
GSMUA_Achr2P12180_001	Banana	nucleus	49.42	34.32
Os09t0307800-01	Rice	cytosol	43.24	32.94
VIT_16s0039g00740.t01	Wine grape	mitochondrion	55.21	31.5
TraesCS7A01G453700.1	Wheat	nucleus	40.93	31.36
TraesCS7B01G354300.1	Wheat	nucleus	40.54	30.88
TraesCS7D01G443000.1	Wheat	nucleus	40.15	30.77
TraesCS5D01G184500.1	Wheat	nucleus	42.08	30.7
TraesCS5A01G179900.1	Wheat	nucleus	42.08	30.11
Zm00001d005563_P006	Maize	nucleus	39.38	30.09
Solyc12g100290.1.1	Tomato	nucleus	50.19	29.95
TraesCS5B01G177800.2	Wheat	nucleus	41.7	29.83
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	51.35	29.49
Zm00001d020038_P001	Maize	nucleus	39.0	28.37
HORVU5Hr1G054880.2	Barley	mitochondrion	40.93	27.68
OQU89246	Sorghum	nucleus	39.38	27.35
HORVU7Hr1G103420.7	Barley	nucleus	40.15	25.18
Bra010270.1-P	Field mustard	nucleus	32.82	17.21
Bra015723.1-P	Field mustard	nucleus	25.1	14.1
Bra033334.1-P	Field mustard	nucleus	15.44	6.27
Bra003056.1-P	Field mustard	nucleus	17.37	6.22
Bra040838.1-P	Field mustard	mitochondrion, nucleus	20.85	5.79
Bra032592.1-P	Field mustard	nucleus	13.9	5.63
Bra036300.1-P	Field mustard	nucleus	15.83	5.26
Bra021721.1-P	Field mustard	nucleus	18.53	4.99
Bra003467.1-P	Field mustard	nucleus	18.92	4.73
Bra032169.1-P	Field mustard	nucleus, plastid	16.22	4.63
Bra015678.1-P	Field mustard	nucleus	28.57	4.47
Bra027983.1-P	Field mustard	nucleus	19.69	3.93

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	EnsemblPlantsGene:Bra003396	EnsemblPlants:Bra003396.1	EnsemblPlants:Bra003396.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740
GO:GO:0032259	InterPro:IPR001214	InterPro:IPR003616	UniProt:M4CGR3	PFAM:PF00856	PFscan:PS50280
PFscan:PS50868	PANTHER:PTHR22884	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF82199
UniParc:UPI0002541785	SEG:seg	:	:	:	:

Description

AT3G59960 (E=2e-067) ASHH4, SDG24 | ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4); histone-lysine N-methyltransferase

Coordinates

chrA07:+:13006028..13008383

Molecular Weight (calculated)

29807.8 Da

IEP (calculated)

9.528

GRAVY (calculated)

-0.692

Length

259 amino acids

Sequence
(BLAST)

001: MHQVGDYSKR YLAMVTAKNK GSGRNQVKKG FRKFSKQMEG SEKFKSPDRL NKRKPDFIKR SCYFQVVHLV ARADTEKCGY GIVADEDINS GEFIIEYVGE
101: VIDNEICVQR LRKLKHKVET NFYLCQINNN LLVDATYKGN KSRYFNHSCD PNTVMQKWMI DGETRLGIFA TRDINKGEHL TYDYQLVQFG PDQDCHCGAV
201: CCKKKLGAKA SKTKNIPKDE DVNLTACKVV TRKRPKVKYE DGVTENIDMS REVWKFTAV

Best Arabidopsis Sequence Match ( AT3G59960.4 )
(BLAST)

001: MSSSKKGSDR NQIRKSLRKL KKQIGELEKL ESPDRLNNVK PIFIKRNIYL KKKLKKKVKD HGIFCSCSLD PGSSTLCGSD CNCGILLSSC SSSCKCSSEC
101: TNKPFQQRHI KKMKLVQTEK CGYGIVADED INSGEFIIEY VGEVIDDKIC EERLWKLNHK VETNFYLCQI NWNMVIDATH KGNKSRYINH SCSPNTEMQK
201: WIIDGETRIG IFATRFINKG EQLTYDYQFV QFGADQDCYC GAVCCRKKLG AKPCKTKNTT LEEAVKPVAC KVTWKTPKGK TRGRRIAG

Arabidopsis Description

ASHH4histone-lysine N-methyltransferase ASHH4 [Source:TAIR;Acc:AT3G59960]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.