Factsheet for Bra003467.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67860	Canola	nucleus	86.18	92.53
CDY25072	Canola	nucleus	83.96	88.95
AT3G61740.1	Thale cress	nucleus	71.69	72.89
Os01t0655300-01	Rice	cytosol, nucleus	3.48	69.23
KRH06474	Soybean	nucleus	49.28	51.67
KRH47912	Soybean	nucleus	49.37	51.67
VIT_15s0046g00760.t01	Wine grape	nucleus	48.31	47.98
Zm00001d044020_P001	Maize	cytosol	11.69	47.27
KRH68208	Soybean	nucleus	43.28	45.57
Bra040838.1-P	Field mustard	mitochondrion, nucleus	40.77	45.28
GSMUA_Achr2P06290_001	Banana	nucleus	41.26	44.99
GSMUA_Achr10P...	Banana	nucleus	42.32	44.92
Solyc01g095890.2.1	Tomato	nucleus	45.31	44.75
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	42.51	44.62
Bra003056.1-P	Field mustard	nucleus	29.76	42.6
OQU87254	Sorghum	nucleus	35.07	40.92
GSMUA_Achr8P28030_001	Banana	nucleus	39.32	40.74
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	38.65	39.02
TraesCS3D01G237600.2	Wheat	nucleus	38.26	38.75
TraesCS3A01G237200.2	Wheat	nucleus	38.36	38.62
TraesCS3B01G265800.1	Wheat	nucleus	38.26	38.52
Zm00001d011490_P003	Maize	nucleus	38.26	38.15
PGSC0003DMT400023546	Potato	nucleus	25.7	37.78
Bra021721.1-P	Field mustard	nucleus	19.9	21.41
Bra003396.1-P	Field mustard	cytosol	4.73	18.92
Bra000343.1-P	Field mustard	cytosol	6.57	18.78
Bra004809.1-P	Field mustard	nucleus	6.47	18.11
Bra007496.1-P	Field mustard	nucleus	5.89	17.73
Bra010270.1-P	Field mustard	nucleus	8.02	16.8
Bra015723.1-P	Field mustard	nucleus	6.38	14.32
Bra033334.1-P	Field mustard	nucleus	7.73	12.54
Bra036300.1-P	Field mustard	nucleus	9.08	12.05
Bra032592.1-P	Field mustard	nucleus	7.05	11.42
Bra032169.1-P	Field mustard	nucleus, plastid	9.47	10.8
Bra027983.1-P	Field mustard	nucleus	10.14	8.1
Bra015678.1-P	Field mustard	nucleus	8.21	5.13

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra003467
EnsemblPlants:Bra003467.1	EnsemblPlants:Bra003467.1-P	InterPro:EPHD	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	GO:GO:0051571
InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR025780
InterPro:IPR034732	UniProt:M4CGY4	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793
PANTHER:PTHR13793:SF92	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00293
SMART:SM00317	SMART:SM00508	SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI0002541872	InterPro:Znf_PHD
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

AT3G61740 (E=0.0) SDG14, ATX3 | SDG14 (SET DOMAIN PROTEIN 14); DNA binding / protein binding / zinc ion binding

Coordinates

chrA07:-:13348011..13353450

Molecular Weight (calculated)

115962.0 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.472

Length

1035 amino acids

Sequence
(BLAST)

0001: MILKRTLTFE EQNLKRCKVG SEIEYGGKKG EIIVYRRRNR ASVDQPPCRE EAEDCTTSSA GSLTSKESQD QSKSLRGRVR VAPSRFNDSV VDAWGNRRRK
0101: VESKESGRDD EVRVVKKVKG GHGKSAENGS SRKDNGDSSE VDFDGKDANL RVSMLSSSDD ANSLSVRGKG ESFAESGMPK DPAAMRKGVY RPEDFAVGDL
0201: VWAKCGKRFP AWPGKVIDPD SQAPDSVLKH CVPGSLCVMF FGYSKNGTQR DYGWIRQGMM FPFTEFMEKF QDQTNFYNNK ASDFKKALEE AVLAENGVEG
0301: SCGAAEISCP ESSATESDQE HGTASRSQAR FPDTYSLFSL DLQFFSVGSC HVDVRTCDGC GTVMQKSQPE ELLCKHCSKV RRKFSYSSVF FGQKELNPNL
0401: LLQLWKSNQY CGICKRSWHS SDGEDWELEH SNYHCPGCRA QHECAPTVLN EQSPTVLNEQ NSVFESTEKA TETELADEVT VVCNGMEGTY IRKFHVIECK
0501: CGSCGARKQS PSEWERHTGC RAKKWKYSVK VKDTTLTLEK WIAGCSALPL EQGTADCRVL DKQMMLSLLE VAVHQECYGV SKAQDLTSWV CRACETPDIE
0601: RECCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE HMEPAVGLFK IPVNSFLKFC RICKQTHGSC VQCCKCATHF HVMCASRAGY SMEMHCVEKD
0701: GVQRTRKSIY CAFHRKPDPN SNVVVHTPSG VFGSRNLLQN QNGRIKGSRL VLTKKMKLPD SDIHPQTEKS HGSLSAARCR IYSRSNTKAC IWGSHLIFGH
0801: LTFFSIFSCL TTSMKFGTNV SLLLLLFQKV DLEAIPHRLK GPSHHSLGAI ENLNSFKASL SFRAPFVFIE ADTSGFTSFK ERLKHLQRTE NLRVCFGKSG
0901: IHGWGLFARR SIQEGEMIIE YRGVKVRRSV ADLREANYRA QGKDCYLFKI SEEIVIDATN SGNIARLINH SCMPNCYARI VSIGDGEENR IVLIAKTNVT
1001: PGEELTYDYL FEVDESEEIK VPCLCRAPNC RKFMN

Best Arabidopsis Sequence Match ( AT3G61740.1 )
(BLAST)

0001: MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS
0101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
0201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
0301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
0401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
0501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
0601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
0701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK IDLEAISHRL
0801: KGPSHHSLSA IENLNSFKAS FSFRAPFMSV FCFLGATFSE YLRKILISIY LVTHQEADFT SFRERLKHLQ RTENFRVCFG KSGIHGWGLF ARKSIQEGEM
0901: IIEYRGVKVR RSVADLREAN YRSQGKDCYL FKISEEIVID ATDSGNIARL INHSCMPNCY ARIVSMGDGE DNRIVLIAKT NVAAGEELTY DYLFEVDESE
1001: EIKVPCLCKA PNCRKFMN

Arabidopsis Description

ATX3Histone-lysine N-methyltransferase ATX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M364]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.