Factsheet for Bra015678.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010432.1-P
Bra026415.1-P
Bra029192.1-P
Bra035723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77300.1	Bra029192.1-P	AT4G00650.1	20711170
AT1G77300.1	Bra035723.1-P	AT4G00650.1	20711170
AT1G77300.1	Bra010432.1-P	AT4G26630.1	25387881
AT1G77300.1	Bra026415.1-P	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87527	Canola	nucleus	100.0	100.0
CDX88357	Canola	nucleus	95.29	95.29
AT1G77300.1	Thale cress	nucleus	73.87	67.81
VIT_18s0001g01700.t01	Wine grape	nucleus	27.16	43.19
Solyc04g057880.2.1	Tomato	nucleus	29.03	34.46
Solyc06g059960.2.1	Tomato	nucleus	30.84	30.69
Bra007496.1-P	Field mustard	nucleus	6.16	29.65
Bra003396.1-P	Field mustard	cytosol	4.47	28.57
KRH53306	Soybean	nucleus	35.06	28.48
KRH64610	Soybean	nucleus	35.37	28.12
Bra000343.1-P	Field mustard	cytosol	5.97	27.35
Bra015723.1-P	Field mustard	nucleus	7.54	27.11
Bra004809.1-P	Field mustard	nucleus	5.97	26.76
GSMUA_Achr9P08570_001	Banana	nucleus	29.15	23.84
TraesCS2B01G015500.1	Wheat	nucleus	25.59	23.62
OQU85110	Sorghum	nucleus	26.86	23.37
TraesCS2A01G005000.1	Wheat	nucleus	25.47	23.31
HORVU2Hr1G000940.11	Barley	nucleus	25.47	23.29
TraesCS2D01G007100.1	Wheat	nucleus	25.47	23.03
Zm00001d016804_P002	Maize	nucleus	24.38	22.51
Bra010270.1-P	Field mustard	nucleus	6.58	22.06
Bra032592.1-P	Field mustard	nucleus	5.01	12.99
Bra033334.1-P	Field mustard	nucleus	4.89	12.7
Bra036300.1-P	Field mustard	nucleus	5.79	12.31
Bra032169.1-P	Field mustard	nucleus, plastid	5.73	10.47
Bra021721.1-P	Field mustard	nucleus	5.55	9.56
Bra003056.1-P	Field mustard	nucleus	4.16	9.54
Bra040838.1-P	Field mustard	mitochondrion, nucleus	4.95	8.8
Bra003467.1-P	Field mustard	nucleus	5.13	8.21
Bra027983.1-P	Field mustard	nucleus	5.43	6.94

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	Gene3D:3.30.40.100	InterPro:AWS_dom	EnsemblPlantsGene:Bra015678
EnsemblPlants:Bra015678.1	EnsemblPlants:Bra015678.1-P	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006629	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008219	GO:GO:0008270	GO:GO:0009553	GO:GO:0009555	GO:GO:0009653
GO:GO:0009791	GO:GO:0009908	GO:GO:0009910	GO:GO:0009987	GO:GO:0010223	GO:GO:0010363
GO:GO:0010452	GO:GO:0016043	GO:GO:0016116	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0031062	GO:GO:0032259	GO:GO:0040029	GO:GO:0042800	GO:GO:0043067	GO:GO:0048481
GO:GO:0048653	GO:GO:0051568	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560	InterPro:IPR011124
UniProt:M4DGQ3	PFAM:PF00856	PFAM:PF07496	PFscan:PS50280	PFscan:PS50868	PFscan:PS51050
PFscan:PS51215	PANTHER:PTHR22884	PANTHER:PTHR22884:SF466	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00508	SMART:SM00570	SUPFAM:SSF82199	UniParc:UPI0002541AA1	InterPro:Znf_CW	SEG:seg

Description

AT1G77300 (E=0.0) EFS, SDG8, CCR1 | EFS (EARLY FLOWERING IN SHORT DAYS); histone methyltransferase(H3-K36 specific) / histone methyltransferase(H3-K4 specific)

Coordinates

chrA07:-:21396314..21403536

Molecular Weight (calculated)

181283.0 Da

IEP (calculated)

5.788

GRAVY (calculated)

-0.765

Length

1657 amino acids

Sequence
(BLAST)

0001: MDCKENGVSD PSGDENLTSA AMDINGSLSE KAGEDIESIT SLETPQAASV TNLAMEEAER ECFVEVEQMG EGNSVSKEVE ENSDAVCCVD AEQAQGSVSD
0101: AIVPGDGTVL PLGVRETDGE SVFLNDAPEK VESLETAKDI EDDKAGSDGE GKEGNNEPSS DDVSLIRSCP FPDSALDSGG LGCSETENDV KSSSDIDGNI
0201: PLVVSPSLAI TELLSNSDGG LRSCDLDYIV DKETIDPDSR LVHEDELHTD LSEKNETLLR NHVGNSSSES DVAGMNDDVA ADPRAQSFSR TSPIEENTSG
0301: VEANAPITDP SLVRSFPLKF GNGGIGARNP ENAVESIRIV DGNGRIGGEV ASASGTSESS PRRRSRVGKH GNLSQTNLSA PLPRKSSRKK QSERNLESIF
0401: NCSKQKRSSV SKPDRSSQWG LPCRTAEIFL QSNNIPYGRP PHHETKQPQN SPKNGEHNPQ ASSGSCLRLK VKFGKSGGQN PLNITVSKVS GNSLPAGGIV
0501: KAGKGLEFPG PADIVEDKLQ IVETREQLKE KNNSLEKLSC QLLSDSITDE KKNQDAGGLC RKLGGDVLDE GTHRSSSMVV EEGERANGTR PLDSETSPDS
0601: EVINSVQKDL PHGFSSTAED LVNTNRGLEK QDELLASVSP LENGSHLIPN AKKSTHPKSK GNGTRKGKSK SKSAKGGRKN ESQAGLEQHS FINRSAGSDD
0701: SKDHEVGRVE SNETTGALLD ANIGKPSAVN GAIWQDGIHG EAVMDLTIED SSPTESAWVR CDDCFKWRRI PASVVESIDE SSRWICMNNS DKDFAHCSIS
0801: QEMSNEEINE QLGIGQDEAD AYDYEAAKRG KDKEQKSKRL PVNKKACFRA IKTNQFLHRN RKNQTIDEIM VCHCKPPPDG RLGCGEECLN RMLNIECLHG
0901: TCPAGDLCSN QQFQKRKYVK FERFQSGKKG YGLRLLEDVR EGQFLIEYVG EVLDMQSYES RQKDYASMGQ KHFYFMTLNG NEVIDAGAKG NLGRFINHSC
1001: EPNCRTEKWM VNGEICVGIF SMKDLKKGQE LTFDYNYVRV FGAAAKKCYC GSSHCRGYIG GDPLNGDVVV QSDSDEEYPE LVILDDDESG EGILDATSKI
1101: FMDGADMQMP QNSTKVDDSK DLASQSPSSV AVKLPESEVL PSFQPTEASK ELSTDMPVID VQQEVLEKKT KGPSPASKSI SRLSSDGANA DKTVKHGSGE
1201: DVKILSRPRP RTKTSRSSGS SKQALPGVNK AQTTPVKKLQ QQPIKSKGSE EVSPSGRIET FEGKLNELLD AGGGISKRRD SAKGYLKLLL LTAASRGNAN
1301: EGIQSNRDLS MILDALLKTK SRTVLVDVIN KNGLQMLHNI MKQYRRDFKK TPILRKLLKV LEYLATRDIL ALEHIVRPPP YAGMESFKQS ILTLTEHDDK
1401: QVHQIARNFR DRFIPKHLRK PWRIDREERS ESRRSPINSR FRSSQEPRYD HHSPRRAEPF SSRAATPETP SVSDGCIQPT SSSLPETNGR KRKSRWDQPS
1501: TSKEQRTMTD VQDDLPPGFS SPCTDAPNAV TAQPQAKFLS RLTVSYGIPL SIVHQCGSPC KDDPNSWSVA PGVPFAPFPP LPPVTHGEFF ANKRNGTVSA
1601: SPKRKREFSS DIGTSYFRQQ KQNVPPWIRY NGWEKTANSS IPEASNCREE DQQSRKS

Best Arabidopsis Sequence Match ( AT1G77300.1 )
(BLAST)

0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS

Arabidopsis Description

EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.