Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g059960.2.1 | Tomato | nucleus | 61.68 | 51.71 |
| VIT_18s0001g01700.t01 | Wine grape | nucleus | 36.53 | 48.94 |
| Solyc07g006060.2.1 | Tomato | nucleus | 6.88 | 39.02 |
| Solyc07g008580.1.1 | Tomato | nucleus | 6.95 | 34.89 |
| Solyc09g060000.1.1 | Tomato | nucleus | 5.66 | 30.04 |
| KRH53306 | Soybean | nucleus | 42.98 | 29.41 |
| Bra015678.1-P | Field mustard | nucleus | 34.46 | 29.03 |
| CDX87527 | Canola | nucleus | 34.46 | 29.03 |
| CDX88357 | Canola | nucleus | 34.24 | 28.85 |
| KRH64610 | Soybean | nucleus | 42.62 | 28.55 |
| Solyc07g008500.1.1 | Tomato | nucleus | 5.8 | 28.12 |
| Solyc07g008460.2.1 | Tomato | nucleus | 8.88 | 27.43 |
| AT1G77300.1 | Thale cress | nucleus | 34.17 | 26.43 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 36.82 | 25.37 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 8.09 | 25.06 |
| Solyc12g100290.1.1 | Tomato | nucleus | 7.74 | 24.88 |
| OQU85110 | Sorghum | nucleus | 31.38 | 23.0 |
| Zm00001d016804_P002 | Maize | nucleus | 29.23 | 22.73 |
| TraesCS2B01G015500.1 | Wheat | nucleus | 29.08 | 22.62 |
| TraesCS2D01G007100.1 | Wheat | nucleus | 29.66 | 22.6 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 29.23 | 22.52 |
| TraesCS2A01G005000.1 | Wheat | nucleus | 29.15 | 22.49 |
| Solyc02g093200.2.1 | Tomato | endoplasmic reticulum, vacuole | 5.52 | 16.63 |
| Solyc03g112690.1.1 | Tomato | nucleus | 5.52 | 11.96 |
| Solyc09g098260.1.1 | Tomato | nucleus | 4.94 | 11.73 |
| Solyc01g079390.2.1 | Tomato | nucleus | 6.23 | 10.49 |
| Solyc03g044380.2.1 | Tomato | nucleus | 6.16 | 9.34 |
| Solyc01g095890.2.1 | Tomato | nucleus | 6.59 | 8.78 |
| Solyc03g083410.2.1 | Tomato | mitochondrion, nucleus | 6.02 | 8.56 |
| Solyc01g006880.2.1 | Tomato | nucleus | 6.09 | 5.33 |
| Solyc02g093190.2.1 | Tomato | nucleus | 0.72 | 2.97 |
| Solyc09g098250.2.1 | Tomato | nucleus | 1.22 | 2.31 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | Gene3D:3.30.40.100 | InterPro:AWS_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 |
| GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR011124 | UniProt:K4BSY1 |
| PFAM:PF00856 | PFAM:PF07496 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51050 | PFscan:PS51215 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00570 |
| SUPFAM:SSF82199 | EnsemblPlantsGene:Solyc04g057880.2 | EnsemblPlants:Solyc04g057880.2.1 | UniParc:UPI0002766026 | InterPro:Znf_CW | SEG:seg |
Description
No Description!
Coordinates
chr4:+:54989428..55011626
Molecular Weight (calculated)
154046.0 Da
IEP (calculated)
8.143
GRAVY (calculated)
-0.680
Length
1396 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVQAVEHNSV LEIAQSEHKK SKTTKKGKGK GRQGKNHTGQ NSQRSKGKSS IPTGPISLKV KFGSRCLMDV VPLIDDHMDK QCTTGKEFKE LPNVARNFDD
0101: RLEAGLPSLQ FSSCNRNLDN VYVSVSELCL SGKNISQEPV DKHLDFHHES PSQEGTSIDN RCSDSGTSPD SEVINLVPDN QIIEGEPEEL NDLIPSRPSV
0201: APGDVLSLRV YDRSKKGRKK DRLPKFASSG SKDLLSSDSM SNSQIFGPLM QGDKVQGGSC YADTSALTIG RISSGNISST EIISGELLPC SGVPEFNISC
0301: AASKLGSGIE GNVCSSFGTE SPETEFAEKV VSCHDGQNIT KSGRSNLSGK GRSQVPTQKL SKSRESASKK KGNKEKQDNK LEVRHENNQV KSLSEVKNHP
0401: GTENEAPYGF GEVGSRNETL SGGISDLDIM RSEVSQPYLQ PRNAWVQCDD CQKWRRIASV LADKIEETNC KWTCKDNLDR DLADCSIAQE KSNSEINAEL
0501: EISDASGEED VLRTRLNSNR SGQKKAPVSL QSSWTLIKRN SFLHRSRKSQ TIDEIMVCHC KPSERRMGCG EGCLNRMLNV ECVRGSCPCG ERCSNQQFQK
0601: RNYAKLKCFK CGKKGYGLQL LEDVSKGQFL IEYVGEVLDL HAYDARQKEY ALKGHKHFYF MTLNGSEVID ACAKGNLGRF INHSCDPNCC TEKWMVNGEV
0701: CIGLFALRDI KKGEEVTFDY NYVRVFGAAA KKCVCGSPRC LGYIGGDLQN AEVIVQADSD DDYPEPVVLC EDGDMGDELN KILSARSSFD VTEIRTPGET
0801: PKNKYKLDEP FTGNLETTTQ THTQNIMKQE NSNMDSVAAF GLKIKEESNK WHNVSPSLSL KKKESSEAME GLESLLHSSV RPVGNSLQSE DITAKTISEV
0901: KRECLDAVKI SSALPSPNAM LSKSLRKKSG NGETSDESLK SSRRSSSVKK GKSKNSAVNM TSAPDVNNKL QIPQPKFKKP THDSANGRFE AVEEKLNELL
1001: DHDGGISKRR DASRCYLKLL LLTAASGDNC NGEAIQSNRD LSMILDALLK TKSRTVLVDI IDKNGLQMLH NIMKRSQREF NKIPILRKLL KVLEYLAARG
1101: ILSHEHINGG PSRPGVESFR VSILGLTEHI DKQVHQIARN FRDRWIRRPL RKSSCIDRDD SQIDLRPSPR YNRCSPLQDH CGVKPSETEE CTSHLMVEST
1201: RIDAGVLDGS STSCVDGATN GARKRKRKSR WDQEAELDVD QRIETNAVDD RTQDIDDAPP GFSIPKKASR ISCGASSSAD CSLQEPSCKK HPHPVVTGHL
1301: QQRFISRLPV SYGIPLSVVQ QFGSPQKERC DAWSVAPGVP FHPFPPLPTY PHDRRDPISP ADNAAGIFSK PPQNPQHGLS THNPPRLSGA SLRKIL
0101: RLEAGLPSLQ FSSCNRNLDN VYVSVSELCL SGKNISQEPV DKHLDFHHES PSQEGTSIDN RCSDSGTSPD SEVINLVPDN QIIEGEPEEL NDLIPSRPSV
0201: APGDVLSLRV YDRSKKGRKK DRLPKFASSG SKDLLSSDSM SNSQIFGPLM QGDKVQGGSC YADTSALTIG RISSGNISST EIISGELLPC SGVPEFNISC
0301: AASKLGSGIE GNVCSSFGTE SPETEFAEKV VSCHDGQNIT KSGRSNLSGK GRSQVPTQKL SKSRESASKK KGNKEKQDNK LEVRHENNQV KSLSEVKNHP
0401: GTENEAPYGF GEVGSRNETL SGGISDLDIM RSEVSQPYLQ PRNAWVQCDD CQKWRRIASV LADKIEETNC KWTCKDNLDR DLADCSIAQE KSNSEINAEL
0501: EISDASGEED VLRTRLNSNR SGQKKAPVSL QSSWTLIKRN SFLHRSRKSQ TIDEIMVCHC KPSERRMGCG EGCLNRMLNV ECVRGSCPCG ERCSNQQFQK
0601: RNYAKLKCFK CGKKGYGLQL LEDVSKGQFL IEYVGEVLDL HAYDARQKEY ALKGHKHFYF MTLNGSEVID ACAKGNLGRF INHSCDPNCC TEKWMVNGEV
0701: CIGLFALRDI KKGEEVTFDY NYVRVFGAAA KKCVCGSPRC LGYIGGDLQN AEVIVQADSD DDYPEPVVLC EDGDMGDELN KILSARSSFD VTEIRTPGET
0801: PKNKYKLDEP FTGNLETTTQ THTQNIMKQE NSNMDSVAAF GLKIKEESNK WHNVSPSLSL KKKESSEAME GLESLLHSSV RPVGNSLQSE DITAKTISEV
0901: KRECLDAVKI SSALPSPNAM LSKSLRKKSG NGETSDESLK SSRRSSSVKK GKSKNSAVNM TSAPDVNNKL QIPQPKFKKP THDSANGRFE AVEEKLNELL
1001: DHDGGISKRR DASRCYLKLL LLTAASGDNC NGEAIQSNRD LSMILDALLK TKSRTVLVDI IDKNGLQMLH NIMKRSQREF NKIPILRKLL KVLEYLAARG
1101: ILSHEHINGG PSRPGVESFR VSILGLTEHI DKQVHQIARN FRDRWIRRPL RKSSCIDRDD SQIDLRPSPR YNRCSPLQDH CGVKPSETEE CTSHLMVEST
1201: RIDAGVLDGS STSCVDGATN GARKRKRKSR WDQEAELDVD QRIETNAVDD RTQDIDDAPP GFSIPKKASR ISCGASSSAD CSLQEPSCKK HPHPVVTGHL
1301: QQRFISRLPV SYGIPLSVVQ QFGSPQKERC DAWSVAPGVP FHPFPPLPTY PHDRRDPISP ADNAAGIFSK PPQNPQHGLS THNPPRLSGA SLRKIL
0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLLL QGWKALRTLF YHSPSMTTIR FIILRGASET DGYLSILENL GASTGRRDRS
1501: L
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLLL QGWKALRTLF YHSPSMTTIR FIILRGASET DGYLSILENL GASTGRRDRS
1501: L
Arabidopsis Description
EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.