Factsheet for Solyc02g093200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 1
nucleus 3
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g02100.t01	Wine grape	cytosol	8.86	45.56
Solyc03g044380.2.1	Tomato	nucleus	66.74	33.55
Solyc01g079390.2.1	Tomato	nucleus	47.52	26.54
Solyc07g006060.2.1	Tomato	nucleus	11.23	21.14
Solyc07g008580.1.1	Tomato	nucleus	11.45	19.06
Solyc09g060000.1.1	Tomato	nucleus	8.64	15.21
Solyc07g008500.1.1	Tomato	nucleus	8.86	14.24
Solyc07g008460.2.1	Tomato	nucleus	13.17	13.5
Solyc09g098260.1.1	Tomato	nucleus	15.33	12.07
Solyc12g100290.1.1	Tomato	nucleus	11.23	11.98
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	11.45	11.75
Solyc03g112690.1.1	Tomato	nucleus	14.9	10.71
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	15.33	7.24
Solyc01g095890.2.1	Tomato	nucleus	15.77	6.97
Solyc04g057880.2.1	Tomato	nucleus	16.63	5.52
Solyc01g006880.2.1	Tomato	nucleus	15.55	4.51
Solyc02g093190.2.1	Tomato	nucleus	3.24	4.45
Solyc06g059960.2.1	Tomato	nucleus	15.77	4.38
Solyc09g098250.2.1	Tomato	nucleus	0.22	0.14

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	InterPro:CXC_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0031519	GO:GO:0032259
GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214	InterPro:IPR025778	InterPro:IPR026489	UniProt:K4BDB6
PFAM:PF00856	PFscan:PS50280	PFscan:PS51633	PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SANT/Myb
InterPro:SET_dom	SMART:SM00317	SMART:SM00717	SUPFAM:SSF82199	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g093200.2
EnsemblPlants:Solyc02g093200.2.1	UniParc:UPI0002768318	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:54136289..54147900

Molecular Weight (calculated)

52696.3 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.571

Length

463 amino acids

Sequence
(BLAST)

001: MEKTMSNHLK LLIILRCLVG NIGSCSLESQ QPQCGRTSRR EVSPVLGSKN YFQGEGFGCQ YKEAACAKNG MNYDDTLREN EFGDENNCNQ EIDGEKSWRP
101: LEKALFEKGL EMFGRSSCMI ARNLLNGLKT CWEVFQYMNN FENKLSLVSD GMNGIFQGSF KGDGHTIVGN QPQRKSRFLH RRGRVRRLKY TGKSAGYNAL
201: RKRISERKDK LRRHYNPCNC QVPCGKECPC IVNGTLCEKY CQCRSRQCPC FAVDRECDPD VCRNCWISCG DGTLDIPPQR SDSNDCENMK LLLKQRQRVL
301: LGRSDVSGWG AFLKNSVGKH EYLGEYTGEI ISHHEADRRG KIYDLINSSF LFNLDDQCVL DAYRKGDKLK FANHSPDPNC YPKVIMAGGD HKVGIFAKQR
401: ICAGEELFYD YCYAPDTPHV WARKPEAPTT RKFFLEDLMC LAGVISCRMV MESMRTLGSI LVK

Best Arabidopsis Sequence Match ( AT2G23380.1 )
(BLAST)

001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA

Arabidopsis Description

CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.