Factsheet for Solyc07g008580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059166	Potato	nucleus	79.5	72.7
Solyc09g060000.1.1	Tomato	nucleus	43.88	46.39
CDX67669	Canola	cytosol, nucleus, plastid	39.93	43.19
Solyc07g008500.1.1	Tomato	nucleus	43.88	42.36
Solyc07g008460.2.1	Tomato	nucleus	67.63	41.59
VIT_18s0072g00220.t01	Wine grape	nucleus	49.64	37.3
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	50.0	37.07
Solyc07g006060.2.1	Tomato	nucleus	29.86	33.74
Bra015723.1-P	Field mustard	nucleus	52.16	31.45
CDX88310	Canola	nucleus	52.16	31.45
CDX87571	Canola	nucleus	52.16	31.45
KRH35109	Soybean	nucleus	52.88	30.62
KRG91687	Soybean	nucleus	53.6	30.04
VIT_18s0072g00200.t01	Wine grape	nucleus	54.68	29.51
AT1G76710.3	Thale cress	nucleus	53.6	28.71
TraesCS2D01G300800.1	Wheat	nucleus	51.44	28.49
TraesCS2A01G302100.1	Wheat	nucleus	51.44	28.49
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	50.72	27.98
Zm00001d003679_P006	Maize	nucleus	51.44	27.88
EES10812	Sorghum	nucleus	51.8	27.64
TraesCS2B01G317900.1	Wheat	nucleus	51.44	27.03
Os04t0429100-01	Rice	nucleus	50.36	27.03
GSMUA_Achr10P...	Banana	nucleus	52.88	26.78
Solyc12g100290.1.1	Tomato	nucleus	31.65	20.28
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	30.22	18.63
Solyc02g093200.2.1	Tomato	endoplasmic reticulum, vacuole	19.06	11.45
Solyc09g098260.1.1	Tomato	nucleus	20.14	9.52
Solyc03g112690.1.1	Tomato	nucleus	21.94	9.47
Solyc01g079390.2.1	Tomato	nucleus	21.58	7.24
Solyc04g057880.2.1	Tomato	nucleus	34.89	6.95
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	22.3	6.32
Solyc03g044380.2.1	Tomato	nucleus	20.5	6.19
Solyc01g095890.2.1	Tomato	nucleus	22.66	6.01
Solyc06g059960.2.1	Tomato	nucleus	35.97	6.01
Solyc01g006880.2.1	Tomato	nucleus	20.86	3.63
Solyc09g098250.2.1	Tomato	nucleus	1.08	0.41
Solyc02g093190.2.1	Tomato	nucleus	0.36	0.3

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR006560	UniProt:K4CBX7	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868
PFscan:PS51215	PANTHER:PTHR22884	PANTHER:PTHR22884:SF293	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00570	SUPFAM:SSF82199	EnsemblPlantsGene:Solyc07g008580.1	EnsemblPlants:Solyc07g008580.1.1	UniParc:UPI000276B5EF	:

Description

No Description!

Coordinates

chr7:-:3538000..3540486

Molecular Weight (calculated)

32117.9 Da

IEP (calculated)

7.980

GRAVY (calculated)

-0.699

Length

278 amino acids

Sequence
(BLAST)

001: MVHSVEDKSN VMSCYRHKKL KEDDIAICQC KYDTSDPKSA CVDRCLNVLT NTECTPGYCQ CGDSCNNQMF QQREYAKTKL FRTNERGWGL FADENIKAGQ
101: FIIEYCGEVI SSEAAKKRSY VYEAHEVKDT YMITLDTNYV IDSTRKGNFS RFLNHSCRPN CETRKWTVLG ETRLGIFAMK DISVGKELTI NYYFEWYAGA
201: TVRCLCGAAN CCIFLGAKSQ RFKEYNHVWK DGNDSHQRKH EKKLPSTRGY ENKLTLKLNS AYEETRPTIE EHGYCAHQ

Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)

001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK

Arabidopsis Description

ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.