Factsheet for TraesCS2B01G317900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G302100.1	Wheat	nucleus	93.38	98.41
TraesCS2D01G300800.1	Wheat	nucleus	92.63	97.61
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	91.49	96.03
Os04t0429100-01	Rice	nucleus	75.99	77.61
EES10812	Sorghum	nucleus	70.89	71.98
Zm00001d003679_P006	Maize	nucleus	69.0	71.15
CDX67669	Canola	cytosol, nucleus, plastid	28.92	59.53
KRH35109	Soybean	nucleus	51.61	56.88
CDX87571	Canola	nucleus	49.15	56.4
Bra015723.1-P	Field mustard	nucleus	48.96	56.18
CDX88310	Canola	nucleus	48.96	56.18
GSMUA_Achr10P...	Banana	nucleus	57.47	55.37
VIT_18s0072g00220.t01	Wine grape	nucleus	38.37	54.86
KRG91687	Soybean	nucleus	51.42	54.84
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	38.75	54.67
VIT_18s0072g00200.t01	Wine grape	nucleus	50.09	51.46
Solyc07g008580.1.1	Tomato	nucleus	27.03	51.44
AT1G76710.3	Thale cress	nucleus	49.91	50.87
Solyc07g008460.2.1	Tomato	nucleus	43.29	50.66
PGSC0003DMT400059166	Potato	nucleus	28.73	50.0
PGSC0003DMT400028500	Potato	nucleus	36.48	48.13
Solyc09g060000.1.1	Tomato	nucleus	23.44	47.15
PGSC0003DMT400028514	Potato	nucleus	19.85	46.88
PGSC0003DMT400059198	Potato	nucleus	31.57	46.65
PGSC0003DMT400086207	Potato	nucleus	20.79	44.18
Solyc07g008500.1.1	Tomato	nucleus	24.01	44.1
TraesCS7B01G354300.1	Wheat	nucleus	17.39	27.06
TraesCS5B01G177800.2	Wheat	nucleus	17.96	26.24
TraesCS6B01G249100.1	Wheat	nucleus	16.64	11.8
TraesCS7B01G028500.2	Wheat	nucleus	11.15	7.36
TraesCS7B01G028200.2	Wheat	nucleus	11.91	7.1
TraesCS4B01G181400.3	Wheat	nucleus, plastid	11.72	6.97
TraesCS2B01G015500.1	Wheat	nucleus	22.68	6.69
TraesCS3B01G265800.1	Wheat	nucleus	11.72	6.03
TraesCS3B01G161800.3	Wheat	plastid	11.15	5.93
TraesCS5B01G046300.1	Wheat	nucleus, plastid	13.8	5.64
TraesCS5B01G163000.1	Wheat	nucleus, plastid	11.53	5.62
TraesCS5B01G360200.1	Wheat	plastid	12.67	3.47

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	InterPro:AWS_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560	PFAM:PF00856
PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PANTHER:PTHR45396	InterPro:Post-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00570	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS2B01G317900	EnsemblPlants:TraesCS2B01G317900.1	:

Description

No Description!

Coordinates

chr2B:+:453748386..453752279

Molecular Weight (calculated)

59326.0 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.584

Length

529 amino acids

Sequence
(BLAST)

001: MEEEPTEAPL YIHIETNVFS YRRHKRQKEE DIAVCECQYD LMDPDSACGE RCWNVSTNTE CTPGYCRCGV YCKNQCCNTV NLLSAASSPT DAYHGNAVYE
101: QVRFQKSQYA RTRLVKTEGR GWGLLADENI TAGQFVIEYC GEVISWKEAK RRSQAYEDQG LTESYIIYLN ADESIDATKK GSLARFINHS CQPNCETRKW
201: TVLGEVRVGI FAKQDIPIGT ELSYDYNFEW FGGVMVRCLC GATGCSGFLG AKSRGFQEAT YLWEDDDDRF SVENIPLYDS TDDEHTSIPK DTIPAKDEPV
301: TQENNSNVAH TTENPEIASS NEFTPLSVEP LMASSDELTP MTIEPLIAVP VGVDIMENGL TEYGAQYSDD TTQNSMHKVA KLENQSSPQN NNHHTELVLV
401: RPTPKFRGGK AKRGLRKQLN VADICDRLAS AAARQEILFC EEVKKQATAE IDALYDEIRP AIEEHERDSQ DNVSTSLAEQ WIEASCCKYK AEFDLSAAII
501: KNLASTPLRA KEDVNPREQN GVLYLQNGP

Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)

001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK

Arabidopsis Description

ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.